Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.24□□□□□ -2.05
H3F3AP84243 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.24□□□□□ -2.05
H3F3AP84243 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.24□□□□□ -2.05
H3F3AP84243 RNA5SP320-201ENST00000516263 124 ntBASIC2.24□□□□□ -2.05
H3F3AP84243 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.24□□□□□ -2.05
H3F3AP84243 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.24□□□□□ -2.05
H3F3AP84243 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.24□□□□□ -2.05
H3F3AP84243 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.24□□□□□ -2.05
H3F3AP84243 AC018630.1-201ENST00000541376 925 ntBASIC2.24□□□□□ -2.05
H3F3AP84243 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.24□□□□□ -2.05
H3F3AP84243 AF131215.7-201ENST00000602443 707 ntBASIC2.24□□□□□ -2.05
H3F3AP84243 AL160237.3-201ENST00000604114 1013 ntBASIC2.24□□□□□ -2.05
H3F3AP84243 AC006329.2-201ENST00000611491 394 ntBASIC2.24□□□□□ -2.05
H3F3AP84243 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
H3F3AP84243 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.24□□□□□ -2.05
H3F3AP84243 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
H3F3AP84243 AC111188.2-201ENST00000529697 1387 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.23□□□□□ -2.05
H3F3AP84243 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.23□□□□□ -2.05
H3F3AP84243 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
H3F3AP84243 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.23□□□□□ -2.05
H3F3AP84243 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
H3F3AP84243 RNU1-138P-201ENST00000384093 164 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 MIR634-201ENST00000385208 97 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 AC092745.2-202ENST00000411880 369 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 RPS15AP38-201ENST00000413110 372 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
H3F3AP84243 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.23□□□□□ -2.05
H3F3AP84243 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.23□□□□□ -2.05
H3F3AP84243 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.23□□□□□ -2.05
H3F3AP84243 AC009296.1-201ENST00000443146 155 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
H3F3AP84243 AC133134.1-201ENST00000466800 359 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 KC877373.1-201ENST00000479066 408 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 RPS15AP34-201ENST00000487776 387 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.23□□□□□ -2.05
H3F3AP84243 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.23□□□□□ -2.05
H3F3AP84243 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.23□□□□□ -2.05
H3F3AP84243 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.23□□□□□ -2.05
H3F3AP84243 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.23□□□□□ -2.05
H3F3AP84243 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.23□□□□□ -2.05
H3F3AP84243 CKS1BP7-201ENST00000522230 235 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 MED28P6-201ENST00000558776 231 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 AC103810.1-201ENST00000579873 453 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.23□□□□□ -2.05
H3F3AP84243 NRBF2P5-201ENST00000603087 788 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 RPL12P50-201ENST00000603116 116 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 AC006023.1-201ENST00000603944 259 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.23□□□□□ -2.05
H3F3AP84243 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.23□□□□□ -2.05
H3F3AP84243 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
H3F3AP84243 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
H3F3AP84243 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.22□□□□□ -2.05
H3F3AP84243 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.22□□□□□ -2.05
H3F3AP84243 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
H3F3AP84243 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
H3F3AP84243 AL359511.1-201ENST00000402970 211 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AC096533.1-201ENST00000411645 353 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AL035410.1-201ENST00000427409 427 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AC092427.1-202ENST00000430569 476 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.22□□□□□ -2.05
H3F3AP84243 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
H3F3AP84243 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.22□□□□□ -2.05
H3F3AP84243 RPS12P2-201ENST00000439728 269 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 OR6K5P-201ENST00000447050 945 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 RPL31P50-201ENST00000471002 296 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AC093663.2-201ENST00000484625 313 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AC010625.1-201ENST00000511296 403 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.22□□□□□ -2.05
H3F3AP84243 RNA5SP148-201ENST00000516527 94 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 RNA5SP471-201ENST00000516971 106 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 RNA5SP402-201ENST00000517148 110 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.22□□□□□ -2.05
H3F3AP84243 UBTFL10-201ENST00000528532 562 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.22□□□□□ -2.05
H3F3AP84243 AC009163.5-201ENST00000575421 637 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 MIR4672-201ENST00000583126 81 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AC022387.2-201ENST00000604050 448 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AL136363.1-201ENST00000605349 337 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AC024560.3-201ENST00000608482 349 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AC245517.5-201ENST00000611529 162 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.22□□□□□ -2.05
H3F3AP84243 AC007998.5-201ENST00000622938 237 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AC024595.1-201ENST00000623088 387 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AC092608.3-201ENST00000625017 386 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 AL365361.1-201ENST00000566942 3481 ntBASIC2.22□□□□□ -2.05
H3F3AP84243 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
H3F3AP84243 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
H3F3AP84243 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.21□□□□□ -2.06
H3F3AP84243 RNU6-543P-201ENST00000362576 108 ntBASIC2.21□□□□□ -2.06
H3F3AP84243 U3.12-201ENST00000364498 214 ntBASIC2.21□□□□□ -2.06
H3F3AP84243 SET-203ENST00000372688 801 ntTSL 2 BASIC2.21□□□□□ -2.06
H3F3AP84243 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
H3F3AP84243 RNU6-1151P-201ENST00000384684 107 ntBASIC2.21□□□□□ -2.06
H3F3AP84243 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
H3F3AP84243 AC099677.1-201ENST00000420575 175 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms