Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.23□□□□□ -1.89
CX3CL1P78423 PGBD4P3-201ENST00000440731 581 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 RPS4XP4-201ENST00000443195 763 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 RPL17P49-201ENST00000443728 411 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AC099563.1-201ENST00000456086 418 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 RPL23AP31-201ENST00000456160 467 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 VN1R17P-201ENST00000472048 1090 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC092451.1-201ENST00000480211 153 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 RN7SL271P-201ENST00000487601 295 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC092104.1-201ENST00000497346 1441 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CL1P78423 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 ARL2BPP4-201ENST00000506854 471 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 FTH1P9-201ENST00000513251 355 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 RN7SKP289-201ENST00000517244 295 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 IGKV2D-23-201ENST00000518179 286 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AC008489.1-201ENST00000524271 483 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 DEFB108D-201ENST00000527787 222 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AP003181.2-201ENST00000528941 181 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 CCNG2P1-201ENST00000549521 1000 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AC025884.1-201ENST00000556034 378 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AL133153.1-201ENST00000557756 303 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AC007599.1-201ENST00000568688 1174 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CL1P78423 MIR3611-201ENST00000584484 83 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.23□□□□□ -1.89
CX3CL1P78423 HMGN1P30-201ENST00000589286 268 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC040904.1-201ENST00000590850 223 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AC007687.1-201ENST00000602704 304 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AL034351.1-201ENST00000605288 668 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC004908.2-201ENST00000609090 574 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC023043.4-201ENST00000612081 449 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AL355810.1-201ENST00000614629 552 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC008250.2-201ENST00000615261 205 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 AC092656.1-203ENST00000624134 423 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.23□□□□□ -1.89
CX3CL1P78423 AC244205.2-202ENST00000635781 342 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 OR52H1-202ENST00000641796 1061 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CL1P78423 HSPA8P1-201ENST00000425843 1833 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 NCAPGP1-201ENST00000505112 1814 ntBASIC3.23□□□□□ -1.89
CX3CL1P78423 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.23□□□□□ -1.89
CX3CL1P78423 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.23□□□□□ -1.89
CX3CL1P78423 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CL1P78423 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CX3CL1P78423 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CX3CL1P78423 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.22□□□□□ -1.89
CX3CL1P78423 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CL1P78423 RNU5A-8P-201ENST00000364102 114 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.22□□□□□ -1.89
CX3CL1P78423 RNU6-432P-201ENST00000384196 109 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 SNORA70C-201ENST00000384538 135 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CX3CL1P78423 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CX3CL1P78423 RNU6-754P-201ENST00000391166 107 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 RNU4-65P-201ENST00000410473 140 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 RNU6-248P-201ENST00000410720 107 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 RPS3AP3-201ENST00000411933 242 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 SPA17P1-201ENST00000416656 452 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 PPP1R11P2-201ENST00000423543 382 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CL1P78423 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CL1P78423 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CL1P78423 RPL35AP22-201ENST00000436855 335 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CX3CL1P78423 AL031667.1-201ENST00000440222 725 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CL1P78423 MTND6P13-201ENST00000443510 523 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 RPL21P89-201ENST00000444021 467 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 MTCO2P7-201ENST00000446518 666 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 TPT1P12-201ENST00000448968 492 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CL1P78423 AL033528.1-201ENST00000453780 140 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 RPL5P32-201ENST00000454085 879 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CL1P78423 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CL1P78423 RAP1BP2-201ENST00000478270 544 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.22□□□□□ -1.89
CX3CL1P78423 AC079140.3-201ENST00000511111 550 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.22□□□□□ -1.89
CX3CL1P78423 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
CX3CL1P78423 AP000857.1-201ENST00000532151 543 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.22□□□□□ -1.89
CX3CL1P78423 TOMM20P2-201ENST00000540082 421 ntBASIC3.22□□□□□ -1.89
CX3CL1P78423 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms