Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.9□□□□□ -1.63
HERVK_113P62684 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.9□□□□□ -1.63
HERVK_113P62684 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.9□□□□□ -1.63
HERVK_113P62684 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HERVK_113P62684 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.9□□□□□ -1.63
HERVK_113P62684 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.9□□□□□ -1.63
HERVK_113P62684 Z84480.1-201ENST00000605131 311 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 BNIP3P10-201ENST00000605360 577 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.9□□□□□ -1.63
HERVK_113P62684 AL359697.1-201ENST00000624879 587 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 CR381572.1-201ENST00000625098 102 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 AC008013.2-202ENST00000637965 364 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.9□□□□□ -1.63
HERVK_113P62684 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.9□□□□□ -1.63
HERVK_113P62684 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HERVK_113P62684 AC092326.2-201ENST00000624772 1561 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 AC090971.4-201ENST00000560291 1800 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HERVK_113P62684 BTBD10P1-201ENST00000549824 1352 ntBASIC4.9□□□□□ -1.63
HERVK_113P62684 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.89□□□□□ -1.63
HERVK_113P62684 AC114546.3-201ENST00000623582 1734 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.89□□□□□ -1.63
HERVK_113P62684 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.89□□□□□ -1.63
HERVK_113P62684 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HERVK_113P62684 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERVK_113P62684 MAPK10-304ENST00000641341 3984 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.89□□□□□ -1.63
HERVK_113P62684 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERVK_113P62684 RNU1-108P-201ENST00000362556 161 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 RNU6-97P-201ENST00000363387 104 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 RNY4P16-201ENST00000364768 94 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 NUP35P2-201ENST00000416748 943 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 ELOCP4-201ENST00000420090 333 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 AC012065.2-201ENST00000421295 375 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 EIF4EP1-201ENST00000422311 642 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 MTND1P14-201ENST00000427400 950 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.89□□□□□ -1.63
HERVK_113P62684 BNIP3P2-201ENST00000441221 577 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.89□□□□□ -1.63
HERVK_113P62684 AC093019.1-201ENST00000443135 252 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.89□□□□□ -1.63
HERVK_113P62684 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.89□□□□□ -1.63
HERVK_113P62684 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.89□□□□□ -1.63
HERVK_113P62684 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.89□□□□□ -1.63
HERVK_113P62684 RNA5SP246-201ENST00000458909 119 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 RPL36AP51-201ENST00000487216 318 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 AC093677.1-201ENST00000514414 678 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 RFPL4AP5-201ENST00000514977 504 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 AC107934.1-201ENST00000522215 217 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 IFITM8P-201ENST00000522529 394 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.89□□□□□ -1.63
HERVK_113P62684 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.89□□□□□ -1.63
HERVK_113P62684 AL035413.2-201ENST00000604801 525 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 AC007038.2-201ENST00000608095 740 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 AC128687.2-201ENST00000609657 566 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 AL355472.4-201ENST00000610233 626 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.89□□□□□ -1.63
HERVK_113P62684 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.89□□□□□ -1.63
HERVK_113P62684 AC010338.1-201ENST00000621823 717 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 YWHAEP7-203ENST00000622054 312 ntBASIC4.89□□□□□ -1.63
HERVK_113P62684 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HERVK_113P62684 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERVK_113P62684 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERVK_113P62684 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HERVK_113P62684 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HERVK_113P62684 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.89□□□□□ -1.63
HERVK_113P62684 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.89□□□□□ -1.63
HERVK_113P62684 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
HERVK_113P62684 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HERVK_113P62684 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HERVK_113P62684 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HERVK_113P62684 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HERVK_113P62684 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HERVK_113P62684 AC067945.1-201ENST00000342609 618 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 Y_RNA.86-201ENST00000363020 111 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 RNA5SP22-201ENST00000365393 109 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HERVK_113P62684 RNU1-44P-201ENST00000384453 163 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 RNU6-908P-201ENST00000410160 94 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.88□□□□□ -1.63
HERVK_113P62684 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.88□□□□□ -1.63
HERVK_113P62684 MRPL50P2-201ENST00000416821 482 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.88□□□□□ -1.63
HERVK_113P62684 AL049734.2-201ENST00000441066 616 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 FDX1P2-201ENST00000450769 375 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 SNRPGP6-201ENST00000451124 220 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.88□□□□□ -1.63
HERVK_113P62684 RPS26P28-201ENST00000470806 348 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 AC110792.2-201ENST00000510278 224 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 AP003497.1-201ENST00000528472 562 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.88□□□□□ -1.63
HERVK_113P62684 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.88□□□□□ -1.63
HERVK_113P62684 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.88□□□□□ -1.63
HERVK_113P62684 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.88□□□□□ -1.63
HERVK_113P62684 AC124068.1-201ENST00000563131 678 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 AC090615.1-201ENST00000577519 154 ntBASIC4.88□□□□□ -1.63
HERVK_113P62684 AC025588.3-201ENST00000604182 274 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms