Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL359073.1-201ENST00000448036 403 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.2□□□□□ -1.74
COPB1P53618 MTCO3P20-201ENST00000454926 688 ntBASIC4.2□□□□□ -1.74
COPB1P53618 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.2□□□□□ -1.74
COPB1P53618 RPS3AP17-201ENST00000472594 777 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AC104563.1-201ENST00000476147 376 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.2□□□□□ -1.74
COPB1P53618 PPIAP15-201ENST00000479662 484 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.2□□□□□ -1.74
COPB1P53618 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.2□□□□□ -1.74
COPB1P53618 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.2□□□□□ -1.74
COPB1P53618 AC108078.1-201ENST00000508073 725 ntBASIC4.2□□□□□ -1.74
COPB1P53618 RAC1P2-201ENST00000511164 579 ntBASIC4.2□□□□□ -1.74
COPB1P53618 RN7SKP83-201ENST00000516512 178 ntBASIC4.2□□□□□ -1.74
COPB1P53618 RNU2-46P-201ENST00000517038 113 ntBASIC4.2□□□□□ -1.74
COPB1P53618 NRON-201ENST00000517270 370 ntBASIC4.2□□□□□ -1.74
COPB1P53618 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COPB1P53618 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.2□□□□□ -1.74
COPB1P53618 AC106785.1-201ENST00000565935 262 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AC092325.1-201ENST00000566449 554 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.2□□□□□ -1.74
COPB1P53618 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.2□□□□□ -1.74
COPB1P53618 BBIP1P1-201ENST00000602999 279 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.2□□□□□ -1.74
COPB1P53618 AL390208.1-201ENST00000605885 644 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.2□□□□□ -1.74
COPB1P53618 AL159169.3-201ENST00000608871 561 ntBASIC4.2□□□□□ -1.74
COPB1P53618 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.2□□□□□ -1.74
COPB1P53618 AC124864.2-201ENST00000624736 186 ntBASIC4.2□□□□□ -1.74
COPB1P53618 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
COPB1P53618 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COPB1P53618 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.2□□□□□ -1.74
COPB1P53618 AL122126.1-201ENST00000546905 1318 ntBASIC4.2□□□□□ -1.74
COPB1P53618 FARSBP1-201ENST00000435808 1778 ntBASIC4.19□□□□□ -1.74
COPB1P53618 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COPB1P53618 AL049780.3-201ENST00000624612 1583 ntBASIC4.19□□□□□ -1.74
COPB1P53618 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.19□□□□□ -1.74
COPB1P53618 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COPB1P53618 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COPB1P53618 RNU6-744P-201ENST00000365557 107 ntBASIC4.19□□□□□ -1.74
COPB1P53618 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.19□□□□□ -1.74
COPB1P53618 RNU6-1316P-201ENST00000384242 108 ntBASIC4.19□□□□□ -1.74
COPB1P53618 RPL31P1-201ENST00000398116 372 ntBASIC4.19□□□□□ -1.74
COPB1P53618 SSXP10-201ENST00000402595 565 ntBASIC4.19□□□□□ -1.74
COPB1P53618 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.19□□□□□ -1.74
COPB1P53618 OR4F13P-201ENST00000428478 931 ntBASIC4.19□□□□□ -1.74
COPB1P53618 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COPB1P53618 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.19□□□□□ -1.74
COPB1P53618 SNORA71B-202ENST00000439232 272 ntBASIC4.19□□□□□ -1.74
COPB1P53618 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.19□□□□□ -1.74
COPB1P53618 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.19□□□□□ -1.74
COPB1P53618 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.19□□□□□ -1.74
COPB1P53618 RPL21P11-201ENST00000461458 483 ntBASIC4.19□□□□□ -1.74
COPB1P53618 AC010683.1-201ENST00000473673 378 ntBASIC4.19□□□□□ -1.74
COPB1P53618 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.19□□□□□ -1.74
COPB1P53618 RNU6-718P-201ENST00000516166 105 ntBASIC4.19□□□□□ -1.74
COPB1P53618 RN7SKP209-201ENST00000516888 304 ntBASIC4.19□□□□□ -1.74
COPB1P53618 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.19□□□□□ -1.74
COPB1P53618 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.19□□□□□ -1.74
COPB1P53618 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.19□□□□□ -1.74
COPB1P53618 HMGN1P30-201ENST00000589286 268 ntBASIC4.19□□□□□ -1.74
COPB1P53618 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.19□□□□□ -1.74
COPB1P53618 AC092954.2-201ENST00000609103 430 ntBASIC4.19□□□□□ -1.74
COPB1P53618 AC072046.2-201ENST00000618366 268 ntBASIC4.19□□□□□ -1.74
COPB1P53618 AC009318.4-201ENST00000620496 486 ntBASIC4.19□□□□□ -1.74
COPB1P53618 AC004009.2-201ENST00000623016 728 ntBASIC4.19□□□□□ -1.74
COPB1P53618 CR381653.2-201ENST00000624041 768 ntBASIC4.19□□□□□ -1.74
COPB1P53618 AL157786.1-207ENST00000627771 695 ntBASIC4.19□□□□□ -1.74
COPB1P53618 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.19□□□□□ -1.74
COPB1P53618 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.19□□□□□ -1.74
COPB1P53618 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
COPB1P53618 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
COPB1P53618 AC095050.2-201ENST00000510748 1458 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC097714.1-201ENST00000511272 1647 ntBASIC4.18□□□□□ -1.74
COPB1P53618 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COPB1P53618 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
COPB1P53618 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COPB1P53618 Y_RNA.46-201ENST00000362695 102 ntBASIC4.18□□□□□ -1.74
COPB1P53618 RPL7P25-201ENST00000404151 721 ntBASIC4.18□□□□□ -1.74
COPB1P53618 BTF3P7-201ENST00000407097 488 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.18□□□□□ -1.74
COPB1P53618 AL356095.1-201ENST00000417217 199 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.18□□□□□ -1.74
COPB1P53618 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.18□□□□□ -1.74
COPB1P53618 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.18□□□□□ -1.74
COPB1P53618 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.18□□□□□ -1.74
COPB1P53618 AL353572.1-201ENST00000442490 417 ntBASIC4.18□□□□□ -1.74
COPB1P53618 FAM103A2P-201ENST00000444122 354 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.18□□□□□ -1.74
COPB1P53618 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.18□□□□□ -1.74
COPB1P53618 PSPHP1-201ENST00000450062 261 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.18□□□□□ -1.74
COPB1P53618 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.18□□□□□ -1.74
COPB1P53618 AC146507.1-201ENST00000468335 354 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AL121769.1-201ENST00000469473 401 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.18□□□□□ -1.74
COPB1P53618 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.18□□□□□ -1.74
COPB1P53618 AC146944.2-203ENST00000502493 354 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC093767.1-201ENST00000504523 156 ntBASIC4.18□□□□□ -1.74
COPB1P53618 AC139495.1-202ENST00000513164 354 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms