Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.39□□□□□ -2.03
NUP98P52948 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NUP98P52948 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.39□□□□□ -2.03
NUP98P52948 MIR591-201ENST00000385290 95 ntBASIC2.39□□□□□ -2.03
NUP98P52948 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.39□□□□□ -2.03
NUP98P52948 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.39□□□□□ -2.03
NUP98P52948 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.39□□□□□ -2.03
NUP98P52948 Z82205.1-201ENST00000428456 297 ntBASIC2.39□□□□□ -2.03
NUP98P52948 MTCYBP31-201ENST00000438855 1122 ntBASIC2.39□□□□□ -2.03
NUP98P52948 AC009961.3-201ENST00000449832 765 ntBASIC2.39□□□□□ -2.03
NUP98P52948 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.39□□□□□ -2.03
NUP98P52948 OR7L1P-201ENST00000456181 380 ntBASIC2.39□□□□□ -2.03
NUP98P52948 AC104472.2-201ENST00000469035 601 ntBASIC2.39□□□□□ -2.03
NUP98P52948 AC109486.1-201ENST00000486833 374 ntBASIC2.39□□□□□ -2.03
NUP98P52948 AC117522.2-201ENST00000510049 657 ntBASIC2.39□□□□□ -2.03
NUP98P52948 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.39□□□□□ -2.03
NUP98P52948 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.39□□□□□ -2.03
NUP98P52948 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.39□□□□□ -2.03
NUP98P52948 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.39□□□□□ -2.03
NUP98P52948 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NUP98P52948 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
NUP98P52948 MTND5P7-201ENST00000413558 1798 ntBASIC2.38□□□□□ -2.03
NUP98P52948 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NUP98P52948 RNA5SP160-201ENST00000364866 120 ntBASIC2.38□□□□□ -2.03
NUP98P52948 U3.37-201ENST00000408528 213 ntBASIC2.38□□□□□ -2.03
NUP98P52948 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.38□□□□□ -2.03
NUP98P52948 AC108667.1-201ENST00000428618 249 ntBASIC2.38□□□□□ -2.03
NUP98P52948 NEK4P1-201ENST00000433383 879 ntBASIC2.38□□□□□ -2.03
NUP98P52948 RPL7P54-201ENST00000438336 674 ntBASIC2.38□□□□□ -2.03
NUP98P52948 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.38□□□□□ -2.03
NUP98P52948 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.38□□□□□ -2.03
NUP98P52948 AP001004.1-201ENST00000582468 324 ntBASIC2.38□□□□□ -2.03
NUP98P52948 AC002984.1-201ENST00000591692 448 ntBASIC2.38□□□□□ -2.03
NUP98P52948 AC010615.3-201ENST00000597319 394 ntBASIC2.38□□□□□ -2.03
NUP98P52948 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NUP98P52948 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NUP98P52948 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.38□□□□□ -2.03
NUP98P52948 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.38□□□□□ -2.03
NUP98P52948 MTND2P16-201ENST00000419987 799 ntBASIC2.38□□□□□ -2.03
NUP98P52948 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.38□□□□□ -2.03
NUP98P52948 HMGB1P45-201ENST00000435986 653 ntBASIC2.38□□□□□ -2.03
NUP98P52948 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.38□□□□□ -2.03
NUP98P52948 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.38□□□□□ -2.03
NUP98P52948 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.38□□□□□ -2.03
NUP98P52948 AC103810.1-201ENST00000579873 453 ntBASIC2.38□□□□□ -2.03
NUP98P52948 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.38□□□□□ -2.03
NUP98P52948 AC091953.2-201ENST00000623979 160 ntBASIC2.38□□□□□ -2.03
NUP98P52948 FAM157B-203ENST00000639350 358 ntBASIC2.38□□□□□ -2.03
NUP98P52948 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
NUP98P52948 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
NUP98P52948 SNORA7.2-201ENST00000364446 145 ntBASIC2.37□□□□□ -2.03
NUP98P52948 RPL26P37-201ENST00000411983 438 ntBASIC2.37□□□□□ -2.03
NUP98P52948 AF274854.1-201ENST00000413236 615 ntBASIC2.37□□□□□ -2.03
NUP98P52948 RAD23BP2-201ENST00000416003 1207 ntBASIC2.37□□□□□ -2.03
NUP98P52948 HMGB1P12-201ENST00000438594 598 ntBASIC2.37□□□□□ -2.03
NUP98P52948 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.37□□□□□ -2.03
NUP98P52948 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP98P52948 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.37□□□□□ -2.03
NUP98P52948 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NUP98P52948 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.37□□□□□ -2.03
NUP98P52948 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.37□□□□□ -2.03
NUP98P52948 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP98P52948 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP98P52948 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP98P52948 AC016727.1-205ENST00000605437 569 ntBASIC2.37□□□□□ -2.03
NUP98P52948 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NUP98P52948 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NUP98P52948 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.36□□□□□ -2.03
NUP98P52948 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
NUP98P52948 RNU6-457P-201ENST00000363999 107 ntBASIC2.36□□□□□ -2.03
NUP98P52948 MIR607-201ENST00000385241 96 ntBASIC2.36□□□□□ -2.03
NUP98P52948 XKRYP4-201ENST00000414395 483 ntBASIC2.36□□□□□ -2.03
NUP98P52948 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP98P52948 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.36□□□□□ -2.03
NUP98P52948 AC104332.2-201ENST00000429959 156 ntBASIC2.36□□□□□ -2.03
NUP98P52948 XKRYP5-201ENST00000449659 483 ntBASIC2.36□□□□□ -2.03
NUP98P52948 AL513343.1-201ENST00000451818 792 ntBASIC2.36□□□□□ -2.03
NUP98P52948 AC006483.1-201ENST00000487308 313 ntBASIC2.36□□□□□ -2.03
NUP98P52948 ATG10-AS1-201ENST00000504846 648 ntBASIC2.36□□□□□ -2.03
NUP98P52948 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
NUP98P52948 HMGN1P28-201ENST00000521340 364 ntBASIC2.36□□□□□ -2.03
NUP98P52948 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP98P52948 AC009314.1-201ENST00000603871 304 ntBASIC2.36□□□□□ -2.03
NUP98P52948 AP000787.2-201ENST00000604432 568 ntBASIC2.36□□□□□ -2.03
NUP98P52948 AC108479.2-201ENST00000617314 601 ntBASIC2.36□□□□□ -2.03
NUP98P52948 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
NUP98P52948 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP98P52948 RNU4-31P-201ENST00000384211 141 ntBASIC2.35□□□□□ -2.03
NUP98P52948 AP000567.1-201ENST00000406413 156 ntBASIC2.35□□□□□ -2.03
NUP98P52948 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.35□□□□□ -2.03
NUP98P52948 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP98P52948 AL157827.1-201ENST00000447622 132 ntBASIC2.35□□□□□ -2.03
NUP98P52948 RPL21P104-201ENST00000464143 478 ntBASIC2.35□□□□□ -2.03
NUP98P52948 AC079804.2-201ENST00000490376 200 ntBASIC2.35□□□□□ -2.03
NUP98P52948 AC021146.7-201ENST00000509604 775 ntBASIC2.35□□□□□ -2.03
NUP98P52948 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.35□□□□□ -2.03
NUP98P52948 TMEM248P1-201ENST00000510579 951 ntBASIC2.35□□□□□ -2.03
NUP98P52948 RNA5SP468-201ENST00000516782 93 ntBASIC2.35□□□□□ -2.03
NUP98P52948 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP98P52948 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms