Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.19□□□□□ -2.06
GTF2A1P52655 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.19□□□□□ -2.06
GTF2A1P52655 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.19□□□□□ -2.06
GTF2A1P52655 AC090751.1-201ENST00000566966 267 ntBASIC2.19□□□□□ -2.06
GTF2A1P52655 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.19□□□□□ -2.06
GTF2A1P52655 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.19□□□□□ -2.06
GTF2A1P52655 MIR3122-201ENST00000577243 73 ntBASIC2.19□□□□□ -2.06
GTF2A1P52655 AC090666.1-201ENST00000578241 445 ntBASIC2.19□□□□□ -2.06
GTF2A1P52655 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.19□□□□□ -2.06
GTF2A1P52655 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.19□□□□□ -2.06
GTF2A1P52655 SRGNP1-201ENST00000603392 451 ntBASIC2.19□□□□□ -2.06
GTF2A1P52655 AL355810.1-201ENST00000614629 552 ntBASIC2.19□□□□□ -2.06
GTF2A1P52655 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
GTF2A1P52655 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.19□□□□□ -2.06
GTF2A1P52655 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.19□□□□□ -2.06
GTF2A1P52655 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.18□□□□□ -2.06
GTF2A1P52655 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.18□□□□□ -2.06
GTF2A1P52655 MIR9-1-201ENST00000385198 89 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 FABP12P1-201ENST00000401911 322 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 AL356967.1-201ENST00000406305 431 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.18□□□□□ -2.06
GTF2A1P52655 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.18□□□□□ -2.06
GTF2A1P52655 UBE2V1P13-201ENST00000436983 439 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 RPS24P13-201ENST00000442520 397 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.18□□□□□ -2.06
GTF2A1P52655 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.18□□□□□ -2.06
GTF2A1P52655 AC092155.2-201ENST00000454675 477 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.18□□□□□ -2.06
GTF2A1P52655 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.18□□□□□ -2.06
GTF2A1P52655 MTCO2P9-201ENST00000503214 694 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 AP000867.2-201ENST00000532468 320 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 MIR4504-201ENST00000577413 92 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.18□□□□□ -2.06
GTF2A1P52655 MIR4429-201ENST00000580105 73 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.18□□□□□ -2.06
GTF2A1P52655 AC106900.2-201ENST00000604994 317 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 AC067747.1-201ENST00000608026 250 ntBASIC2.18□□□□□ -2.06
GTF2A1P52655 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
GTF2A1P52655 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
GTF2A1P52655 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
GTF2A1P52655 AL360182.1-201ENST00000397433 468 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 SFR1P1-201ENST00000403720 688 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.17□□□□□ -2.06
GTF2A1P52655 AJ239321.1-201ENST00000424255 564 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.17□□□□□ -2.06
GTF2A1P52655 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.17□□□□□ -2.06
GTF2A1P52655 NAP1L1P3-201ENST00000462291 880 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 OR4G11P-201ENST00000492842 939 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.17□□□□□ -2.06
GTF2A1P52655 AC108157.1-201ENST00000510511 539 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 SNORA31.8-201ENST00000516327 108 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 RN7SKP96-201ENST00000516948 297 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 SNORA31.18-201ENST00000517043 134 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 POLR2KP1-201ENST00000553226 168 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.17□□□□□ -2.06
GTF2A1P52655 AC023824.2-201ENST00000566185 400 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 AC010546.1-201ENST00000569391 485 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.17□□□□□ -2.06
GTF2A1P52655 MIR3616-201ENST00000584070 92 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 AL669831.4-202ENST00000590817 238 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 HSPE1P7-201ENST00000604681 321 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 AL159169.3-201ENST00000608871 561 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 MIR6075-201ENST00000620782 95 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 AL360181.4-201ENST00000621752 134 ntBASIC2.17□□□□□ -2.06
GTF2A1P52655 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
GTF2A1P52655 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.17□□□□□ -2.06
GTF2A1P52655 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.17□□□□□ -2.06
GTF2A1P52655 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
GTF2A1P52655 RNA5SP258-201ENST00000362750 119 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 RNA5SP56-201ENST00000410277 118 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.16□□□□□ -2.06
GTF2A1P52655 ARF4P4-201ENST00000439608 520 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.16□□□□□ -2.06
GTF2A1P52655 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.16□□□□□ -2.06
GTF2A1P52655 HMGB3P17-201ENST00000504195 649 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 AC008494.2-201ENST00000514544 370 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 SNORA31.23-201ENST00000517219 133 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 AC008562.1-201ENST00000521763 330 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.16□□□□□ -2.06
GTF2A1P52655 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.16□□□□□ -2.06
GTF2A1P52655 CR383656.14-201ENST00000551951 406 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 OR4K7P-201ENST00000580232 945 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 MIR4325-201ENST00000583049 90 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.16□□□□□ -2.06
GTF2A1P52655 AL627230.6-201ENST00000611129 280 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.16□□□□□ -2.06
GTF2A1P52655 OR8B1P-202ENST00000641132 1178 ntBASIC2.16□□□□□ -2.06
GTF2A1P52655 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
GTF2A1P52655 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.15□□□□□ -2.07
GTF2A1P52655 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.15□□□□□ -2.07
GTF2A1P52655 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.15□□□□□ -2.07
GTF2A1P52655 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.15□□□□□ -2.07
GTF2A1P52655 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.15□□□□□ -2.07
GTF2A1P52655 AL139413.1-201ENST00000421309 217 ntBASIC2.15□□□□□ -2.07
GTF2A1P52655 RPL31P63-201ENST00000422565 375 ntBASIC2.15□□□□□ -2.07
GTF2A1P52655 RPL35AP22-201ENST00000436855 335 ntBASIC2.15□□□□□ -2.07
GTF2A1P52655 SDCBPP1-201ENST00000440192 890 ntBASIC2.15□□□□□ -2.07
GTF2A1P52655 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.15□□□□□ -2.07
GTF2A1P52655 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.15□□□□□ -2.07
GTF2A1P52655 C1DP3-201ENST00000455013 423 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms