Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP11P51784 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP11P51784 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP11P51784 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP11P51784 MAPK10-263ENST00000641052 4307 ntBASIC5.44□□□□□ -1.54
USP11P51784 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP11P51784 HSPE1P11-201ENST00000339579 310 ntBASIC5.44□□□□□ -1.54
USP11P51784 Y_RNA.135-201ENST00000363439 95 ntBASIC5.44□□□□□ -1.54
USP11P51784 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 RNU6-310P-201ENST00000384655 107 ntBASIC5.44□□□□□ -1.54
USP11P51784 AL139397.2-201ENST00000404529 772 ntBASIC5.44□□□□□ -1.54
USP11P51784 RNU2-3P-201ENST00000410144 191 ntBASIC5.44□□□□□ -1.54
USP11P51784 RN7SKP235-201ENST00000410662 305 ntBASIC5.44□□□□□ -1.54
USP11P51784 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.44□□□□□ -1.54
USP11P51784 BX510359.2-201ENST00000417920 305 ntBASIC5.44□□□□□ -1.54
USP11P51784 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.44□□□□□ -1.54
USP11P51784 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 AC005154.2-201ENST00000438110 379 ntBASIC5.44□□□□□ -1.54
USP11P51784 AC093156.1-201ENST00000440382 670 ntBASIC5.44□□□□□ -1.54
USP11P51784 AC243772.1-201ENST00000451620 410 ntBASIC5.44□□□□□ -1.54
USP11P51784 RN7SL346P-201ENST00000491561 294 ntBASIC5.44□□□□□ -1.54
USP11P51784 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.44□□□□□ -1.54
USP11P51784 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.44□□□□□ -1.54
USP11P51784 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.44□□□□□ -1.54
USP11P51784 AC104136.1-201ENST00000512969 394 ntBASIC5.44□□□□□ -1.54
USP11P51784 RNU6-347P-201ENST00000516658 105 ntBASIC5.44□□□□□ -1.54
USP11P51784 snoU109.6-201ENST00000516831 118 ntBASIC5.44□□□□□ -1.54
USP11P51784 RNU6-1213P-201ENST00000517075 94 ntBASIC5.44□□□□□ -1.54
USP11P51784 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP11P51784 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.44□□□□□ -1.54
USP11P51784 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.44□□□□□ -1.54
USP11P51784 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.44□□□□□ -1.54
USP11P51784 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.44□□□□□ -1.54
USP11P51784 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.44□□□□□ -1.54
USP11P51784 AC093249.4-201ENST00000564755 259 ntBASIC5.44□□□□□ -1.54
USP11P51784 CYCSP40-201ENST00000575927 294 ntBASIC5.44□□□□□ -1.54
USP11P51784 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.44□□□□□ -1.54
USP11P51784 MIR3672-201ENST00000584290 82 ntBASIC5.44□□□□□ -1.54
USP11P51784 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP11P51784 TAB3P1-202ENST00000452645 1634 ntBASIC5.44□□□□□ -1.54
USP11P51784 API5P2-201ENST00000397055 1498 ntBASIC5.44□□□□□ -1.54
USP11P51784 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.44□□□□□ -1.54
USP11P51784 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
USP11P51784 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.43□□□□□ -1.54
USP11P51784 AC107081.3-201ENST00000612715 2034 ntBASIC5.43□□□□□ -1.54
USP11P51784 MAPK10-349ENST00000641767 3661 ntBASIC5.43□□□□□ -1.54
USP11P51784 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP11P51784 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP11P51784 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
USP11P51784 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
USP11P51784 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
USP11P51784 AL731566.1-201ENST00000620490 1937 ntBASIC5.43□□□□□ -1.54
USP11P51784 RNU6-379P-201ENST00000363813 104 ntBASIC5.43□□□□□ -1.54
USP11P51784 Y_RNA.176-201ENST00000363815 109 ntBASIC5.43□□□□□ -1.54
USP11P51784 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
USP11P51784 RNU6-1029P-201ENST00000384109 107 ntBASIC5.43□□□□□ -1.54
USP11P51784 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP11P51784 AL023807.1-201ENST00000407932 359 ntBASIC5.43□□□□□ -1.54
USP11P51784 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.43□□□□□ -1.54
USP11P51784 EIF4HP2-201ENST00000424380 563 ntBASIC5.43□□□□□ -1.54
USP11P51784 OR2AH1P-201ENST00000425717 928 ntBASIC5.43□□□□□ -1.54
USP11P51784 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.43□□□□□ -1.54
USP11P51784 AL590233.1-201ENST00000430017 456 ntBASIC5.43□□□□□ -1.54
USP11P51784 RPL36P19-201ENST00000430744 301 ntBASIC5.43□□□□□ -1.54
USP11P51784 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.43□□□□□ -1.54
USP11P51784 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.43□□□□□ -1.54
USP11P51784 AC005019.1-201ENST00000436455 431 ntBASIC5.43□□□□□ -1.54
USP11P51784 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.43□□□□□ -1.54
USP11P51784 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.43□□□□□ -1.54
USP11P51784 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.43□□□□□ -1.54
USP11P51784 RNU7-182P-201ENST00000459009 62 ntBASIC5.43□□□□□ -1.54
USP11P51784 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.43□□□□□ -1.54
USP11P51784 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.43□□□□□ -1.54
USP11P51784 HMGB3P16-201ENST00000508037 287 ntBASIC5.43□□□□□ -1.54
USP11P51784 OR7H2P-201ENST00000513483 306 ntBASIC5.43□□□□□ -1.54
USP11P51784 RPS27AP18-201ENST00000515536 459 ntBASIC5.43□□□□□ -1.54
USP11P51784 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.43□□□□□ -1.54
USP11P51784 BNIP3P1-201ENST00000547295 580 ntBASIC5.43□□□□□ -1.54
USP11P51784 RPL21P12-201ENST00000559810 515 ntBASIC5.43□□□□□ -1.54
USP11P51784 SULT1C2P2-201ENST00000562517 294 ntBASIC5.43□□□□□ -1.54
USP11P51784 AC010653.1-201ENST00000571108 881 ntBASIC5.43□□□□□ -1.54
USP11P51784 MIR5583-1-201ENST00000580941 59 ntBASIC5.43□□□□□ -1.54
USP11P51784 AC060771.1-201ENST00000582031 164 ntBASIC5.43□□□□□ -1.54
USP11P51784 RN7SL435P-201ENST00000584418 282 ntBASIC5.43□□□□□ -1.54
USP11P51784 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.43□□□□□ -1.54
USP11P51784 Z82243.1-201ENST00000609432 473 ntBASIC5.43□□□□□ -1.54
USP11P51784 AL157817.1-201ENST00000614264 790 ntBASIC5.43□□□□□ -1.54
USP11P51784 AC100827.5-201ENST00000615883 426 ntBASIC5.43□□□□□ -1.54
USP11P51784 AL162373.1-201ENST00000620433 407 ntBASIC5.43□□□□□ -1.54
USP11P51784 AC134882.1-201ENST00000603738 1676 ntBASIC5.43□□□□□ -1.54
USP11P51784 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms