Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC137627.1-201ENST00000545761 289 ntBASIC7□□□□□ -1.29
PRIM1P49642 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC7□□□□□ -1.29
PRIM1P49642 AC025423.5-201ENST00000550230 219 ntBASIC7□□□□□ -1.29
PRIM1P49642 AL049839.1-201ENST00000556151 657 ntBASIC7□□□□□ -1.29
PRIM1P49642 AC006600.1-201ENST00000572529 153 ntBASIC7□□□□□ -1.29
PRIM1P49642 RN7SL802P-201ENST00000577858 299 ntBASIC7□□□□□ -1.29
PRIM1P49642 MIR4697-201ENST00000582977 78 ntBASIC7□□□□□ -1.29
PRIM1P49642 AC005191.1-201ENST00000603950 358 ntBASIC7□□□□□ -1.29
PRIM1P49642 AL133481.2-203ENST00000607558 139 ntBASIC7□□□□□ -1.29
PRIM1P49642 RNA5SP439-201ENST00000617595 124 ntBASIC7□□□□□ -1.29
PRIM1P49642 AC007998.5-201ENST00000622938 237 ntBASIC7□□□□□ -1.29
PRIM1P49642 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC7□□□□□ -1.29
PRIM1P49642 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7□□□□□ -1.29
PRIM1P49642 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7□□□□□ -1.29
PRIM1P49642 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7□□□□□ -1.29
PRIM1P49642 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7□□□□□ -1.29
PRIM1P49642 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7□□□□□ -1.29
PRIM1P49642 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
PRIM1P49642 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
PRIM1P49642 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
PRIM1P49642 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.99□□□□□ -1.29
PRIM1P49642 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
PRIM1P49642 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PRIM1P49642 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PRIM1P49642 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
PRIM1P49642 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PRIM1P49642 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
PRIM1P49642 MIR335-201ENST00000362173 94 ntBASIC6.99□□□□□ -1.29
PRIM1P49642 RNA5SP453-201ENST00000362503 119 ntBASIC6.99□□□□□ -1.29
PRIM1P49642 RNU6-637P-201ENST00000384050 107 ntBASIC6.99□□□□□ -1.29
PRIM1P49642 Y_RNA.462-201ENST00000384268 102 ntBASIC6.99□□□□□ -1.29
PRIM1P49642 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.99□□□□□ -1.29
PRIM1P49642 TMEM183AP1-205ENST00000432739 290 ntBASIC6.99□□□□□ -1.29
PRIM1P49642 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.99□□□□□ -1.29
PRIM1P49642 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.99□□□□□ -1.29
PRIM1P49642 DAP3P1-201ENST00000441522 278 ntBASIC6.99□□□□□ -1.29
PRIM1P49642 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.99□□□□□ -1.29
PRIM1P49642 FABP5P13-201ENST00000452144 328 ntBASIC6.99□□□□□ -1.29
PRIM1P49642 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.99□□□□□ -1.29
PRIM1P49642 AC087385.1-201ENST00000475062 312 ntBASIC6.99□□□□□ -1.29
PRIM1P49642 RN7SL459P-201ENST00000481078 302 ntBASIC6.99□□□□□ -1.29
PRIM1P49642 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.99□□□□□ -1.29
PRIM1P49642 AC008745.1-201ENST00000604064 271 ntBASIC6.99□□□□□ -1.29
PRIM1P49642 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC6.99□□□□□ -1.29
PRIM1P49642 MIR6864-201ENST00000617935 70 ntBASIC6.99□□□□□ -1.29
PRIM1P49642 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PRIM1P49642 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PRIM1P49642 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.99□□□□□ -1.29
PRIM1P49642 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.99□□□□□ -1.29
PRIM1P49642 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
PRIM1P49642 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
PRIM1P49642 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.99□□□□□ -1.29
PRIM1P49642 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PRIM1P49642 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
PRIM1P49642 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PRIM1P49642 AC010329.1-201ENST00000593903 8328 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PRIM1P49642 AL078621.3-201ENST00000623707 2042 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PRIM1P49642 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
PRIM1P49642 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
PRIM1P49642 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PRIM1P49642 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PRIM1P49642 Y_RNA.150-201ENST00000363562 102 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 RNU6-1059P-201ENST00000363752 98 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 RNU6-48P-201ENST00000384161 107 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 SNORA51.11-201ENST00000384442 131 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 RPL21P24-201ENST00000413752 448 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.98□□□□□ -1.29
PRIM1P49642 AL590399.4-201ENST00000436561 601 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC6.98□□□□□ -1.29
PRIM1P49642 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.98□□□□□ -1.29
PRIM1P49642 PCMTD1P1-201ENST00000455560 355 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.98□□□□□ -1.29
PRIM1P49642 AC008897.1-201ENST00000494006 347 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.98□□□□□ -1.29
PRIM1P49642 DEFB108D-201ENST00000527787 222 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 AC092470.1-201ENST00000546187 132 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.98□□□□□ -1.29
PRIM1P49642 AC006557.5-201ENST00000603126 811 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 AC010201.1-201ENST00000605051 540 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 AL159153.1-201ENST00000619688 317 ntBASIC6.98□□□□□ -1.29
PRIM1P49642 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PRIM1P49642 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PRIM1P49642 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.98□□□□□ -1.29
PRIM1P49642 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PRIM1P49642 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
PRIM1P49642 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
PRIM1P49642 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PRIM1P49642 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.98□□□□□ -1.29
PRIM1P49642 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PRIM1P49642 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PRIM1P49642 SAGE4P-201ENST00000442271 3381 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 ADAM24P-201ENST00000398655 2101 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
PRIM1P49642 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
PRIM1P49642 SNORD113-1-201ENST00000365321 69 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 RNU6-1293P-201ENST00000384077 107 ntBASIC6.97□□□□□ -1.29
PRIM1P49642 RNA5SP87-201ENST00000384155 118 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms