Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RPL39P6-201ENST00000448289 150 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AL353691.1-201ENST00000451332 387 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 PRSS3P4-201ENST00000453323 162 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC010099.1-201ENST00000455434 375 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 SUMO2P2-201ENST00000456482 255 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.66□□□□□ -1.98
CX3CR1P49238 SETP11-201ENST00000473027 690 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 RN7SL633P-201ENST00000488974 297 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.66□□□□□ -1.98
CX3CR1P49238 AC023424.2-201ENST00000493479 777 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.66□□□□□ -1.98
CX3CR1P49238 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
CX3CR1P49238 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.66□□□□□ -1.98
CX3CR1P49238 CASP1P1-201ENST00000526345 212 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 DEFB108D-201ENST00000527787 222 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AP000867.2-201ENST00000532468 320 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC007536.1-201ENST00000533382 349 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC087894.1-201ENST00000538359 518 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.66□□□□□ -1.98
CX3CR1P49238 CCNG2P1-201ENST00000549521 1000 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC125611.1-201ENST00000549563 229 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC087897.1-201ENST00000550134 156 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.66□□□□□ -1.98
CX3CR1P49238 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.66□□□□□ -1.98
CX3CR1P49238 MIR5708-201ENST00000579723 85 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.66□□□□□ -1.98
CX3CR1P49238 AC012119.1-201ENST00000603184 222 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC005014.3-201ENST00000605985 190 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.66□□□□□ -1.98
CX3CR1P49238 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.66□□□□□ -1.98
CX3CR1P49238 LRRC77P-213ENST00000637727 880 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 MIR622-201ENST00000638396 96 ntBASIC2.66□□□□□ -1.98
CX3CR1P49238 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.66□□□□□ -1.98
CX3CR1P49238 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CX3CR1P49238 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CX3CR1P49238 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.65□□□□□ -1.98
CX3CR1P49238 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CX3CR1P49238 SNRPEP3-201ENST00000338402 276 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CX3CR1P49238 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CX3CR1P49238 MIR7-3-201ENST00000384898 110 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AL079342.2-201ENST00000403367 482 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AL356131.1-201ENST00000405826 414 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.65□□□□□ -1.99
CX3CR1P49238 RPS7P9-201ENST00000414704 586 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CR1P49238 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CR1P49238 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.65□□□□□ -1.99
CX3CR1P49238 AL390023.1-201ENST00000428836 262 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AC092427.1-201ENST00000439177 601 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 MTCYBP11-201ENST00000447254 1109 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AL592447.1-201ENST00000447592 540 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.65□□□□□ -1.99
CX3CR1P49238 AC079776.3-201ENST00000450665 370 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 OFD1P3Y-201ENST00000453312 783 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AC026410.2-201ENST00000460281 156 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.65□□□□□ -1.99
CX3CR1P49238 RN7SL601P-201ENST00000471221 293 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AP004217.1-201ENST00000480579 346 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 RPL7P23-201ENST00000493874 747 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CX3CR1P49238 SUMO2P5-201ENST00000506790 245 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AC113420.1-201ENST00000507903 571 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AL359273.1-201ENST00000510918 627 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AC093752.1-206ENST00000511823 336 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 RN7SKP272-201ENST00000516988 232 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.65□□□□□ -1.99
CX3CR1P49238 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CR1P49238 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CR1P49238 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CR1P49238 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CR1P49238 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.65□□□□□ -1.99
CX3CR1P49238 AC034268.2-201ENST00000571784 482 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 MIR3908-201ENST00000579798 126 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AC126365.2-201ENST00000580630 379 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 MIR3609-201ENST00000582661 80 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.65□□□□□ -1.99
CX3CR1P49238 BNIP3P31-201ENST00000604515 566 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AP000254.1-201ENST00000609934 520 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 TUG1_1.1-201ENST00000610654 145 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.65□□□□□ -1.99
CX3CR1P49238 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CX3CR1P49238 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CX3CR1P49238 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.65□□□□□ -1.99
CX3CR1P49238 AC109454.4-201ENST00000623411 649 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 AL138960.2-201ENST00000625145 535 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CX3CR1P49238 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CX3CR1P49238 AC008568.2-201ENST00000623862 2313 ntBASIC2.65□□□□□ -1.99
CX3CR1P49238 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CX3CR1P49238 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CX3CR1P49238 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CX3CR1P49238 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CX3CR1P49238 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CX3CR1P49238 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.64□□□□□ -1.99
CX3CR1P49238 AC073325.2-201ENST00000339545 159 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 RNA5SP72-201ENST00000364442 117 ntBASIC2.64□□□□□ -1.99
CX3CR1P49238 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CX3CR1P49238 RNU6-1257P-201ENST00000384625 110 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms