Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.52□□□□□ -1.85
HNF4AP41235 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.52□□□□□ -1.85
HNF4AP41235 RNU6-579P-201ENST00000516879 102 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.52□□□□□ -1.85
HNF4AP41235 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.52□□□□□ -1.85
HNF4AP41235 AC007991.1-201ENST00000522680 631 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.52□□□□□ -1.85
HNF4AP41235 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.52□□□□□ -1.85
HNF4AP41235 OR4T1P-201ENST00000554933 911 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.52□□□□□ -1.85
HNF4AP41235 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.52□□□□□ -1.85
HNF4AP41235 AC004853.1-201ENST00000604902 698 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 AL109618.2-201ENST00000605527 211 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 AC245008.1-201ENST00000608123 476 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 RMST_8.1-201ENST00000610287 165 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 OR8B1P-202ENST00000641132 1178 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 AC119674.1-207ENST00000641355 633 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 ZNF826P-207ENST00000622273 1910 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
HNF4AP41235 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HNF4AP41235 AC073073.2-201ENST00000609827 2578 ntBASIC3.52□□□□□ -1.85
HNF4AP41235 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HNF4AP41235 DEFB108F-201ENST00000344638 222 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 RNU6-283P-201ENST00000364788 107 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 MIR554-201ENST00000384874 96 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 HMGB1P17-201ENST00000403495 628 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AL445189.1-201ENST00000405722 338 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.51□□□□□ -1.85
HNF4AP41235 MRPL50P2-201ENST00000416821 482 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 CCDC58P2-201ENST00000417131 366 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 MTCO2P5-201ENST00000422621 426 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 MTND4P20-201ENST00000424125 869 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.51□□□□□ -1.85
HNF4AP41235 VN1R108P-201ENST00000431580 830 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.51□□□□□ -1.85
HNF4AP41235 AC024082.2-201ENST00000434771 238 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AC122718.1-201ENST00000439448 744 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 SDCBPP1-201ENST00000440192 890 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 UBE2D3P4-201ENST00000441973 436 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.51□□□□□ -1.85
HNF4AP41235 MTCO2P25-201ENST00000447065 681 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 HMGB3P8-201ENST00000449709 577 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.51□□□□□ -1.85
HNF4AP41235 AL359385.1-201ENST00000456509 365 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.51□□□□□ -1.85
HNF4AP41235 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.51□□□□□ -1.85
HNF4AP41235 FAM133DP-201ENST00000464802 691 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 RPS3AP43-201ENST00000479743 781 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 ACTR3P3-201ENST00000480448 893 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 ACTG1P13-201ENST00000486987 1043 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AC082651.2-201ENST00000496833 166 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AC026784.1-201ENST00000507986 352 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HNF4AP41235 AC010587.2-201ENST00000511727 448 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.51□□□□□ -1.85
HNF4AP41235 RNU6-759P-201ENST00000516740 103 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.51□□□□□ -1.85
HNF4AP41235 AC093331.1-201ENST00000521474 169 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 DEFB108D-201ENST00000527787 222 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.51□□□□□ -1.85
HNF4AP41235 AC023161.2-201ENST00000551218 780 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.51□□□□□ -1.85
HNF4AP41235 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.51□□□□□ -1.85
HNF4AP41235 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.51□□□□□ -1.85
HNF4AP41235 VN1R90P-201ENST00000595717 726 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.51□□□□□ -1.85
HNF4AP41235 AL121772.2-201ENST00000614331 297 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AL596245.1-201ENST00000618994 362 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.51□□□□□ -1.85
HNF4AP41235 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.51□□□□□ -1.85
HNF4AP41235 AC005539.1-201ENST00000443768 1479 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 AC011460.1-201ENST00000636268 1834 ntBASIC3.51□□□□□ -1.85
HNF4AP41235 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HNF4AP41235 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HNF4AP41235 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HNF4AP41235 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.5□□□□□ -1.85
HNF4AP41235 AC007656.2-201ENST00000624902 4547 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HNF4AP41235 FRG1BP-201ENST00000278882 761 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HNF4AP41235 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HNF4AP41235 RNA5SP42-201ENST00000364278 115 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 SNORA14A-201ENST00000364773 135 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HNF4AP41235 RNU6-1200P-201ENST00000384162 107 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 SAR1AP2-201ENST00000392696 594 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AL590084.2-201ENST00000401481 382 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 DHFRP6-201ENST00000401776 268 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 MIR1290-201ENST00000408735 78 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.5□□□□□ -1.85
HNF4AP41235 RPL36AP36-201ENST00000418616 301 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC098592.1-201ENST00000419352 333 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AL035423.1-201ENST00000420331 213 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC245054.1-201ENST00000420944 258 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.5□□□□□ -1.85
HNF4AP41235 AL390023.1-201ENST00000428836 262 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.5□□□□□ -1.85
HNF4AP41235 AL354941.1-201ENST00000438600 464 ntBASIC3.5□□□□□ -1.85
HNF4AP41235 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms