Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RXRBP28702 AC006020.1-201ENST00000420179 1854 ntBASIC5.79□□□□□ -1.48
RXRBP28702 AC006484.1-201ENST00000435086 1884 ntBASIC5.79□□□□□ -1.48
RXRBP28702 AC011755.1-201ENST00000623763 2049 ntBASIC5.79□□□□□ -1.48
RXRBP28702 MTCO1P12-201ENST00000414273 1543 ntBASIC5.79□□□□□ -1.48
RXRBP28702 GVINP1-202ENST00000531871 7271 ntBASIC5.79□□□□□ -1.48
RXRBP28702 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RXRBP28702 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
RXRBP28702 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.78□□□□□ -1.48
RXRBP28702 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
RXRBP28702 AC097461.1-201ENST00000568928 2821 ntBASIC5.78□□□□□ -1.48
RXRBP28702 RNU1-14P-201ENST00000362759 152 ntBASIC5.78□□□□□ -1.48
RXRBP28702 Y_RNA.193-201ENST00000363979 102 ntBASIC5.78□□□□□ -1.48
RXRBP28702 RNU6-169P-201ENST00000365336 107 ntBASIC5.78□□□□□ -1.48
RXRBP28702 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.78□□□□□ -1.48
RXRBP28702 RNU6-730P-201ENST00000383954 104 ntBASIC5.78□□□□□ -1.48
RXRBP28702 SNORA5A-201ENST00000384111 134 ntBASIC5.78□□□□□ -1.48
RXRBP28702 Y_RNA.452-201ENST00000384202 108 ntBASIC5.78□□□□□ -1.48
RXRBP28702 RNU6-831P-201ENST00000384548 107 ntBASIC5.78□□□□□ -1.48
RXRBP28702 RNU6-225P-201ENST00000384613 103 ntBASIC5.78□□□□□ -1.48
RXRBP28702 RNU6-952P-201ENST00000391164 108 ntBASIC5.78□□□□□ -1.48
RXRBP28702 AL592114.1-201ENST00000403842 483 ntBASIC5.78□□□□□ -1.48
RXRBP28702 RNA5SP36-201ENST00000410197 133 ntBASIC5.78□□□□□ -1.48
RXRBP28702 RN7SKP235-201ENST00000410662 305 ntBASIC5.78□□□□□ -1.48
RXRBP28702 RNU2-6P-201ENST00000411404 190 ntBASIC5.78□□□□□ -1.48
RXRBP28702 AC096664.2-201ENST00000411843 406 ntBASIC5.78□□□□□ -1.48
RXRBP28702 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.78□□□□□ -1.48
RXRBP28702 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.78□□□□□ -1.48
RXRBP28702 AL353777.1-201ENST00000425552 326 ntBASIC5.78□□□□□ -1.48
RXRBP28702 RPS3AP52-201ENST00000435639 297 ntBASIC5.78□□□□□ -1.48
RXRBP28702 SNRPEP4-201ENST00000435815 279 ntBASIC5.78□□□□□ -1.48
RXRBP28702 MRPL48P1-201ENST00000445390 636 ntBASIC5.78□□□□□ -1.48
RXRBP28702 AC012671.1-201ENST00000451912 203 ntBASIC5.78□□□□□ -1.48
RXRBP28702 RPL21P71-201ENST00000465598 459 ntBASIC5.78□□□□□ -1.48
RXRBP28702 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.78□□□□□ -1.48
RXRBP28702 HMGB3P15-201ENST00000507326 574 ntBASIC5.78□□□□□ -1.48
RXRBP28702 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.78□□□□□ -1.48
RXRBP28702 COPS8P3-201ENST00000526024 482 ntBASIC5.78□□□□□ -1.48
RXRBP28702 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.78□□□□□ -1.48
RXRBP28702 AC123904.2-201ENST00000548059 300 ntBASIC5.78□□□□□ -1.48
RXRBP28702 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.78□□□□□ -1.48
RXRBP28702 AC004817.2-201ENST00000561794 651 ntBASIC5.78□□□□□ -1.48
RXRBP28702 AC099489.2-201ENST00000574976 260 ntBASIC5.78□□□□□ -1.48
RXRBP28702 MIR3118-1-201ENST00000581787 76 ntBASIC5.78□□□□□ -1.48
RXRBP28702 AC093913.1-201ENST00000614178 329 ntBASIC5.78□□□□□ -1.48
RXRBP28702 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.78□□□□□ -1.48
RXRBP28702 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RXRBP28702 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
RXRBP28702 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RXRBP28702 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RXRBP28702 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RXRBP28702 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RXRBP28702 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RXRBP28702 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.77□□□□□ -1.48
RXRBP28702 MTND5P33-201ENST00000571250 1450 ntBASIC5.77□□□□□ -1.49
RXRBP28702 AC119744.1-201ENST00000454746 1715 ntBASIC5.77□□□□□ -1.49
RXRBP28702 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RXRBP28702 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.77□□□□□ -1.49
RXRBP28702 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.77□□□□□ -1.49
RXRBP28702 MUC2-202ENST00000613187 4845 ntBASIC5.77□□□□□ -1.49
RXRBP28702 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RXRBP28702 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RXRBP28702 NACAP2-201ENST00000318548 624 ntBASIC5.77□□□□□ -1.49
RXRBP28702 RN7SKP44-201ENST00000363602 316 ntBASIC5.77□□□□□ -1.49
RXRBP28702 RNU11-4P-201ENST00000391149 133 ntBASIC5.77□□□□□ -1.49
RXRBP28702 AL583835.1-201ENST00000399570 407 ntBASIC5.77□□□□□ -1.49
RXRBP28702 AL591416.1-201ENST00000404015 867 ntBASIC5.77□□□□□ -1.49
RXRBP28702 AP000580.1-201ENST00000404439 358 ntBASIC5.77□□□□□ -1.49
RXRBP28702 RNU4-14P-201ENST00000410858 122 ntBASIC5.77□□□□□ -1.49
RXRBP28702 SNORA57.3-201ENST00000411095 141 ntBASIC5.77□□□□□ -1.49
RXRBP28702 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.77□□□□□ -1.49
RXRBP28702 AC009161.1-201ENST00000417306 376 ntBASIC5.77□□□□□ -1.49
RXRBP28702 MTCO2P27-201ENST00000420740 428 ntBASIC5.77□□□□□ -1.49
RXRBP28702 AL590609.2-201ENST00000421430 368 ntBASIC5.77□□□□□ -1.49
RXRBP28702 BEND7P1-201ENST00000422058 457 ntBASIC5.77□□□□□ -1.49
RXRBP28702 AC019097.1-201ENST00000424783 735 ntBASIC5.77□□□□□ -1.49
RXRBP28702 DUTP6-201ENST00000425573 462 ntBASIC5.77□□□□□ -1.49
RXRBP28702 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.77□□□□□ -1.49
RXRBP28702 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.77□□□□□ -1.49
RXRBP28702 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RXRBP28702 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.77□□□□□ -1.49
RXRBP28702 SNORA25.17-201ENST00000517184 124 ntBASIC5.77□□□□□ -1.49
RXRBP28702 RN7SKP256-201ENST00000517201 314 ntBASIC5.77□□□□□ -1.49
RXRBP28702 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.77□□□□□ -1.49
RXRBP28702 AL163153.1-201ENST00000554223 283 ntBASIC5.77□□□□□ -1.49
RXRBP28702 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.77□□□□□ -1.49
RXRBP28702 HMGB1P6-201ENST00000569046 646 ntBASIC5.77□□□□□ -1.49
RXRBP28702 AC120057.2-201ENST00000571520 271 ntBASIC5.77□□□□□ -1.49
RXRBP28702 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RXRBP28702 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RXRBP28702 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RXRBP28702 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.77□□□□□ -1.49
RXRBP28702 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RXRBP28702 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RXRBP28702 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.77□□□□□ -1.49
RXRBP28702 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.77□□□□□ -1.49
RXRBP28702 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RXRBP28702 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
RXRBP28702 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RXRBP28702 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms