Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.83□□□□□ -1.64
ATP2A2P16615 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.83□□□□□ -1.64
ATP2A2P16615 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.83□□□□□ -1.64
ATP2A2P16615 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATP2A2P16615 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ATP2A2P16615 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATP2A2P16615 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATP2A2P16615 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.83□□□□□ -1.64
ATP2A2P16615 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATP2A2P16615 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.82□□□□□ -1.64
ATP2A2P16615 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATP2A2P16615 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ATP2A2P16615 RNU6-1090P-201ENST00000364065 94 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 RNU5A-8P-201ENST00000364102 114 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 Y_RNA.493-201ENST00000384422 102 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 RAP1BP3-201ENST00000407180 549 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 RNA5SP56-201ENST00000410277 118 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 HMGB3P20-201ENST00000417997 600 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 AC005517.2-201ENST00000424673 553 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.82□□□□□ -1.64
ATP2A2P16615 TIMM9P1-201ENST00000436122 256 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 RPL29P29-201ENST00000448725 423 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 AL162151.2-201ENST00000448875 158 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 MTND3P10-201ENST00000450967 341 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 AC108059.3-201ENST00000456388 214 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.82□□□□□ -1.64
ATP2A2P16615 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.82□□□□□ -1.64
ATP2A2P16615 AC008958.1-201ENST00000511047 682 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 Y_RNA.704-201ENST00000516851 102 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.82□□□□□ -1.64
ATP2A2P16615 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.82□□□□□ -1.64
ATP2A2P16615 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.82□□□□□ -1.64
ATP2A2P16615 AC022616.3-201ENST00000523940 148 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ATP2A2P16615 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.82□□□□□ -1.64
ATP2A2P16615 AL121579.1-201ENST00000555129 305 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.82□□□□□ -1.64
ATP2A2P16615 AC004908.2-201ENST00000609090 574 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 MIR6875-201ENST00000617506 72 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 AC112204.3-201ENST00000623822 332 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 AC009161.2-201ENST00000624626 138 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.82□□□□□ -1.64
ATP2A2P16615 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATP2A2P16615 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATP2A2P16615 CR848007.1-201ENST00000442354 1699 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATP2A2P16615 MTCO1P24-201ENST00000515438 1558 ntBASIC4.82□□□□□ -1.64
ATP2A2P16615 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ATP2A2P16615 CPHL1P-201ENST00000461341 3407 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATP2A2P16615 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATP2A2P16615 AC068254.2-201ENST00000623938 3577 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ATP2A2P16615 MIR448-201ENST00000362131 111 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 MIR208A-201ENST00000362287 71 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 Y_RNA.89-201ENST00000363031 102 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 RNU6-1097P-201ENST00000363586 107 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 RNU6-1322P-201ENST00000364309 107 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 Y_RNA.295-201ENST00000364918 102 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 RNU6-108P-201ENST00000365558 107 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATP2A2P16615 RNU6-877P-201ENST00000383868 107 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 RPS3AP24-201ENST00000407896 734 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.81□□□□□ -1.64
ATP2A2P16615 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.81□□□□□ -1.64
ATP2A2P16615 MTATP6P18-201ENST00000417994 673 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 AL139413.1-201ENST00000421309 217 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 AC092832.1-201ENST00000422934 400 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 HMGB3P12-201ENST00000438745 556 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 RPL23AP52-201ENST00000439311 478 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.81□□□□□ -1.64
ATP2A2P16615 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
ATP2A2P16615 RAC1P7-201ENST00000445367 377 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 RPL7L1P1-201ENST00000448259 785 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 UBDP1-202ENST00000457888 382 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 AC022364.2-201ENST00000457963 554 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 RPL7L1P8-201ENST00000469911 741 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 RPS27AP13-201ENST00000498403 237 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.81□□□□□ -1.64
ATP2A2P16615 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.81□□□□□ -1.64
ATP2A2P16615 RNA5SP337-201ENST00000517007 109 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 MTND1P35-201ENST00000526739 508 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 AL359212.1-201ENST00000556608 614 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.81□□□□□ -1.64
ATP2A2P16615 COX6CP3-201ENST00000580869 223 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 SLC25A36P1-201ENST00000590111 465 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 AL669831.4-202ENST00000590817 238 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.81□□□□□ -1.64
ATP2A2P16615 AC025253.1-201ENST00000613623 543 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 U73479.1-201ENST00000618062 168 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATP2A2P16615 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.81□□□□□ -1.64
ATP2A2P16615 AC105074.1-201ENST00000623380 3095 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATP2A2P16615 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATP2A2P16615 AL049555.1-201ENST00000562834 1933 ntBASIC4.81□□□□□ -1.64
ATP2A2P16615 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms