Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CD44P16070 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.1□□□□□ -1.27
CD44P16070 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CD44P16070 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.1□□□□□ -1.27
CD44P16070 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.1□□□□□ -1.27
CD44P16070 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CD44P16070 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.1□□□□□ -1.27
CD44P16070 GUCY1B2-204ENST00000531898 1979 ntBASIC7.09□□□□□ -1.27
CD44P16070 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CD44P16070 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CD44P16070 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CD44P16070 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CD44P16070 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
CD44P16070 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CD44P16070 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CD44P16070 SNORA51.5-201ENST00000384126 131 ntBASIC7.09□□□□□ -1.27
CD44P16070 SNORA20B-201ENST00000384220 132 ntBASIC7.09□□□□□ -1.27
CD44P16070 BTF3L4P2-201ENST00000392798 346 ntBASIC7.09□□□□□ -1.27
CD44P16070 RN7SKP281-201ENST00000410472 352 ntBASIC7.09□□□□□ -1.27
CD44P16070 RNA5SP251-201ENST00000410614 137 ntBASIC7.09□□□□□ -1.27
CD44P16070 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC7.09□□□□□ -1.27
CD44P16070 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC7.09□□□□□ -1.27
CD44P16070 AL353705.4-201ENST00000449661 238 ntBASIC7.09□□□□□ -1.27
CD44P16070 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.09□□□□□ -1.27
CD44P16070 AKR1D1P1-201ENST00000457236 936 ntBASIC7.09□□□□□ -1.27
CD44P16070 RPL32P33-201ENST00000487023 394 ntBASIC7.09□□□□□ -1.27
CD44P16070 BTF3L4P4-201ENST00000506381 449 ntBASIC7.09□□□□□ -1.27
CD44P16070 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.09□□□□□ -1.27
CD44P16070 AC103783.1-201ENST00000520506 373 ntBASIC7.09□□□□□ -1.27
CD44P16070 AL133399.1-201ENST00000527476 298 ntBASIC7.09□□□□□ -1.27
CD44P16070 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.09□□□□□ -1.27
CD44P16070 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC7.09□□□□□ -1.27
CD44P16070 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.09□□□□□ -1.27
CD44P16070 MIR3189-201ENST00000578735 73 ntBASIC7.09□□□□□ -1.27
CD44P16070 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC7.09□□□□□ -1.27
CD44P16070 AC114477.1-201ENST00000605097 605 ntBASIC7.09□□□□□ -1.27
CD44P16070 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC7.09□□□□□ -1.27
CD44P16070 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.09□□□□□ -1.27
CD44P16070 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CD44P16070 AL662795.2-201ENST00000624252 3706 ntBASIC7.09□□□□□ -1.27
CD44P16070 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CD44P16070 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CD44P16070 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.09□□□□□ -1.27
CD44P16070 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CD44P16070 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
CD44P16070 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CD44P16070 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
CD44P16070 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.08□□□□□ -1.28
CD44P16070 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CD44P16070 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
CD44P16070 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CD44P16070 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.08□□□□□ -1.28
CD44P16070 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CD44P16070 RNU1-5P-201ENST00000362684 144 ntBASIC7.08□□□□□ -1.28
CD44P16070 Y_RNA.101-201ENST00000363154 102 ntBASIC7.08□□□□□ -1.28
CD44P16070 RNU6-1082P-201ENST00000364574 107 ntBASIC7.08□□□□□ -1.28
CD44P16070 Y_RNA.346-201ENST00000365385 112 ntBASIC7.08□□□□□ -1.28
CD44P16070 MIR27A-201ENST00000385073 78 ntBASIC7.08□□□□□ -1.28
CD44P16070 HLFP1-201ENST00000402375 499 ntBASIC7.08□□□□□ -1.28
CD44P16070 U6atac.2-201ENST00000408644 118 ntBASIC7.08□□□□□ -1.28
CD44P16070 Y_RNA.617-201ENST00000410920 90 ntBASIC7.08□□□□□ -1.28
CD44P16070 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.08□□□□□ -1.28
CD44P16070 ELOBP4-201ENST00000423418 296 ntBASIC7.08□□□□□ -1.28
CD44P16070 RN7SL221P-201ENST00000466190 281 ntBASIC7.08□□□□□ -1.28
CD44P16070 RN7SL350P-201ENST00000492591 299 ntBASIC7.08□□□□□ -1.28
CD44P16070 AC093870.1-201ENST00000506837 213 ntBASIC7.08□□□□□ -1.28
CD44P16070 AC103855.4-201ENST00000533158 265 ntBASIC7.08□□□□□ -1.28
CD44P16070 CR383656.7-201ENST00000548164 174 ntBASIC7.08□□□□□ -1.28
CD44P16070 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC7.08□□□□□ -1.28
CD44P16070 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.08□□□□□ -1.28
CD44P16070 AC005255.1-201ENST00000593748 216 ntBASIC7.08□□□□□ -1.28
CD44P16070 AC013791.1-201ENST00000616619 62 ntBASIC7.08□□□□□ -1.28
CD44P16070 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.08□□□□□ -1.28
CD44P16070 AL353743.1-202ENST00000431724 1695 ntBASIC7.08□□□□□ -1.28
CD44P16070 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.08□□□□□ -1.28
CD44P16070 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.08□□□□□ -1.28
CD44P16070 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CD44P16070 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.08□□□□□ -1.28
CD44P16070 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CD44P16070 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CD44P16070 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CD44P16070 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CD44P16070 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
CD44P16070 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC7.07□□□□□ -1.28
CD44P16070 AC006600.2-201ENST00000624834 2506 ntBASIC7.07□□□□□ -1.28
CD44P16070 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CD44P16070 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CD44P16070 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
CD44P16070 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
CD44P16070 AC138915.1-201ENST00000565427 1685 ntBASIC7.07□□□□□ -1.28
CD44P16070 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
CD44P16070 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CD44P16070 RNA5SP350-201ENST00000363298 111 ntBASIC7.07□□□□□ -1.28
CD44P16070 Y_RNA.163-201ENST00000363702 113 ntBASIC7.07□□□□□ -1.28
CD44P16070 AC092634.1-201ENST00000366505 199 ntBASIC7.07□□□□□ -1.28
CD44P16070 MIR431-201ENST00000385266 114 ntBASIC7.07□□□□□ -1.28
CD44P16070 AC026310.1-201ENST00000396004 378 ntBASIC7.07□□□□□ -1.28
CD44P16070 MIR888-201ENST00000401186 77 ntBASIC7.07□□□□□ -1.28
CD44P16070 ELOCP21-201ENST00000412558 336 ntBASIC7.07□□□□□ -1.28
CD44P16070 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms