Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
VCANP13611 DDX43P2-201ENST00000604753 1354 ntBASIC1.85□□□□□ -2.11
VCANP13611 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VCANP13611 AL136133.1-201ENST00000413694 376 ntBASIC1.85□□□□□ -2.11
VCANP13611 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.85□□□□□ -2.11
VCANP13611 USP9YP8-201ENST00000441913 500 ntBASIC1.85□□□□□ -2.11
VCANP13611 RPL31P41-201ENST00000477967 372 ntBASIC1.85□□□□□ -2.11
VCANP13611 ARL4AP2-201ENST00000507378 601 ntBASIC1.85□□□□□ -2.11
VCANP13611 AC091515.1-201ENST00000548110 679 ntBASIC1.85□□□□□ -2.11
VCANP13611 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
VCANP13611 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.85□□□□□ -2.11
VCANP13611 RNU4-41P-201ENST00000364426 143 ntBASIC1.85□□□□□ -2.11
VCANP13611 AL022400.1-201ENST00000423946 935 ntBASIC1.85□□□□□ -2.11
VCANP13611 RPL30P3-201ENST00000424262 333 ntBASIC1.85□□□□□ -2.11
VCANP13611 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC1.85□□□□□ -2.11
VCANP13611 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.85□□□□□ -2.11
VCANP13611 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.85□□□□□ -2.11
VCANP13611 AC013562.2-201ENST00000611632 603 ntBASIC1.85□□□□□ -2.11
VCANP13611 AL592437.2-201ENST00000421655 2434 ntBASIC1.85□□□□□ -2.11
VCANP13611 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
VCANP13611 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.85□□□□□ -2.11
VCANP13611 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
VCANP13611 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
VCANP13611 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VCANP13611 RNA5SP257-201ENST00000363023 116 ntBASIC1.84□□□□□ -2.11
VCANP13611 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.84□□□□□ -2.11
VCANP13611 MUPP-201ENST00000438111 566 ntBASIC1.84□□□□□ -2.11
VCANP13611 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.84□□□□□ -2.11
VCANP13611 AC092989.1-201ENST00000481235 277 ntBASIC1.84□□□□□ -2.11
VCANP13611 AP000787.2-201ENST00000604432 568 ntBASIC1.84□□□□□ -2.11
VCANP13611 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.84□□□□□ -2.11
VCANP13611 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.84□□□□□ -2.11
VCANP13611 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.84□□□□□ -2.11
VCANP13611 MIR520E-201ENST00000384867 87 ntBASIC1.84□□□□□ -2.11
VCANP13611 RNU2-20P-201ENST00000410425 191 ntBASIC1.84□□□□□ -2.11
VCANP13611 RPL23AP39-201ENST00000415533 405 ntBASIC1.84□□□□□ -2.11
VCANP13611 RAD23BP2-201ENST00000416003 1207 ntBASIC1.84□□□□□ -2.11
VCANP13611 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.84□□□□□ -2.11
VCANP13611 AC234781.2-201ENST00000426370 994 ntBASIC1.84□□□□□ -2.11
VCANP13611 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.84□□□□□ -2.11
VCANP13611 RNA5SP395-201ENST00000516567 118 ntBASIC1.84□□□□□ -2.11
VCANP13611 AC004486.1-201ENST00000546846 233 ntBASIC1.84□□□□□ -2.11
VCANP13611 AC008687.2-201ENST00000597865 520 ntBASIC1.84□□□□□ -2.11
VCANP13611 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.84□□□□□ -2.11
VCANP13611 MTND5P27-201ENST00000428871 1720 ntBASIC1.84□□□□□ -2.12
VCANP13611 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
VCANP13611 AC010680.1-201ENST00000590024 3590 ntBASIC1.84□□□□□ -2.12
VCANP13611 RNU1-22P-201ENST00000363334 158 ntBASIC1.84□□□□□ -2.12
VCANP13611 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.84□□□□□ -2.12
VCANP13611 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.84□□□□□ -2.12
VCANP13611 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
VCANP13611 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.84□□□□□ -2.12
VCANP13611 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
VCANP13611 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VCANP13611 RNU4-51P-201ENST00000364206 140 ntBASIC1.83□□□□□ -2.12
VCANP13611 GSTA12P-201ENST00000402398 508 ntBASIC1.83□□□□□ -2.12
VCANP13611 RN7SKP123-201ENST00000410732 291 ntBASIC1.83□□□□□ -2.12
VCANP13611 RPL31P2-201ENST00000413849 377 ntBASIC1.83□□□□□ -2.12
VCANP13611 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.83□□□□□ -2.12
VCANP13611 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.83□□□□□ -2.12
VCANP13611 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.83□□□□□ -2.12
VCANP13611 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.83□□□□□ -2.12
VCANP13611 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
VCANP13611 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
VCANP13611 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
VCANP13611 AC009969.1-201ENST00000438726 172 ntBASIC1.83□□□□□ -2.12
VCANP13611 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
VCANP13611 MTND4P23-201ENST00000447723 1363 ntBASIC1.83□□□□□ -2.12
VCANP13611 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.82□□□□□ -2.12
VCANP13611 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.82□□□□□ -2.12
VCANP13611 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.82□□□□□ -2.12
VCANP13611 RNA5SP436-201ENST00000516020 115 ntBASIC1.82□□□□□ -2.12
VCANP13611 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.82□□□□□ -2.12
VCANP13611 FAM92A1P1-201ENST00000528023 890 ntBASIC1.82□□□□□ -2.12
VCANP13611 AC109446.2-201ENST00000567872 497 ntBASIC1.82□□□□□ -2.12
VCANP13611 FAM106DP-201ENST00000586416 501 ntBASIC1.82□□□□□ -2.12
VCANP13611 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.82□□□□□ -2.12
VCANP13611 RPL23AP48-201ENST00000406913 488 ntBASIC1.82□□□□□ -2.12
VCANP13611 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.82□□□□□ -2.12
VCANP13611 BX649567.1-201ENST00000642071 1134 ntBASIC1.82□□□□□ -2.12
VCANP13611 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
VCANP13611 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.82□□□□□ -2.12
VCANP13611 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.82□□□□□ -2.12
VCANP13611 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VCANP13611 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
VCANP13611 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.82□□□□□ -2.12
VCANP13611 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
VCANP13611 AC244505.4-201ENST00000434905 287 ntBASIC1.82□□□□□ -2.12
VCANP13611 SSXP5-201ENST00000443473 287 ntBASIC1.82□□□□□ -2.12
VCANP13611 AL583843.1-201ENST00000456070 346 ntBASIC1.82□□□□□ -2.12
VCANP13611 AC023043.3-201ENST00000593113 385 ntBASIC1.82□□□□□ -2.12
VCANP13611 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
VCANP13611 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VCANP13611 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VCANP13611 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.82□□□□□ -2.12
VCANP13611 RBBP8P1-201ENST00000449447 1844 ntBASIC1.82□□□□□ -2.12
VCANP13611 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
VCANP13611 AC021382.1-201ENST00000483523 359 ntBASIC1.81□□□□□ -2.12
VCANP13611 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.81□□□□□ -2.12
VCANP13611 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms