Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD8P13378 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD8P13378 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXD8P13378 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD8P13378 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD8P13378 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXD8P13378 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 RNA5SP505-201ENST00000364748 108 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD8P13378 DEFB109C-201ENST00000382575 264 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 DEFB109B-201ENST00000382656 264 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 Y_RNA.473-201ENST00000384333 102 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 RNU6-101P-201ENST00000410323 104 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 RPL7P10-201ENST00000417407 739 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 AC093106.2-201ENST00000428212 385 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 AC236972.1-201ENST00000433225 199 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXD8P13378 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD8P13378 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXD8P13378 RPL7AP61-201ENST00000443410 636 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXD8P13378 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD8P13378 RPS15AP27-201ENST00000449183 343 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 CEACAMP4-201ENST00000457676 421 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 HMGB1P21-201ENST00000502313 581 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD8P13378 RNU6-699P-201ENST00000517081 110 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 SNORD116.3-201ENST00000517176 78 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD8P13378 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD8P13378 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXD8P13378 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD8P13378 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD8P13378 AC022884.2-201ENST00000578535 580 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 MIR3941-201ENST00000582572 103 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 RN7SL52P-201ENST00000584271 284 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXD8P13378 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXD8P13378 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXD8P13378 RN7SL722P-201ENST00000617780 284 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 RN7SL565P-201ENST00000618246 284 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HOXD8P13378 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
HOXD8P13378 AL158163.1-201ENST00000603915 1649 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.54□□□□□ -1.52
HOXD8P13378 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD8P13378 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD8P13378 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD8P13378 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXD8P13378 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HOXD8P13378 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD8P13378 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD8P13378 XIAPP3-201ENST00000312918 795 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 Y_RNA.153-201ENST00000363615 91 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 RNU1-32P-201ENST00000363937 159 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 Y_RNA.257-201ENST00000364596 102 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 RNU6-328P-201ENST00000390887 106 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 RNU2-47P-201ENST00000410649 186 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 GPS2P1-201ENST00000411761 986 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 BX682237.1-201ENST00000415016 335 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 BX510359.2-201ENST00000417920 305 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXD8P13378 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD8P13378 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXD8P13378 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXD8P13378 Z95327.1-201ENST00000446082 482 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 AL353691.1-201ENST00000451332 387 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 FABP5P13-201ENST00000452144 328 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.53□□□□□ -1.52
HOXD8P13378 HMGB3P30-201ENST00000457863 606 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXD8P13378 RPL30P11-201ENST00000495304 339 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXD8P13378 SCARNA22-201ENST00000503991 125 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXD8P13378 RNU6-1332P-201ENST00000516666 104 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 Y_RNA.721-201ENST00000517207 102 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 AC087854.1-201ENST00000519706 414 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXD8P13378 HMGN1P28-201ENST00000521340 364 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXD8P13378 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXD8P13378 AC068790.4-201ENST00000602474 263 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 AL451044.1-201ENST00000604867 238 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXD8P13378 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD8P13378 Z95327.2-201ENST00000414579 1873 ntBASIC5.53□□□□□ -1.52
HOXD8P13378 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD8P13378 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD8P13378 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXD8P13378 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD8P13378 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXD8P13378 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HOXD8P13378 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXD8P13378 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD8P13378 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD8P13378 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.52□□□□□ -1.53
HOXD8P13378 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD8P13378 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXD8P13378 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms