Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB1P09429 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
HMGB1P09429 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGB1P09429 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB1P09429 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGB1P09429 RAP1BP1-201ENST00000412709 553 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 AC099548.1-201ENST00000421443 426 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB1P09429 USP12PX-201ENST00000432383 1057 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 MTND5P2-201ENST00000442927 1142 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 RPS4XP4-201ENST00000443195 763 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGB1P09429 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB1P09429 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.79□□□□□ -1.64
HMGB1P09429 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGB1P09429 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGB1P09429 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGB1P09429 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB1P09429 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.79□□□□□ -1.64
HMGB1P09429 ZNF321P-202ENST00000550843 495 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB1P09429 AC034105.3-201ENST00000565294 442 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 RN7SL600P-201ENST00000581811 299 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 ARF4P1-201ENST00000605447 541 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB1P09429 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 AL356266.1-201ENST00000623311 483 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 AL359715.5-201ENST00000623431 443 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 AL136313.1-201ENST00000624804 202 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGB1P09429 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGB1P09429 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGB1P09429 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HMGB1P09429 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.79□□□□□ -1.64
HMGB1P09429 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P09429 SNORA56-201ENST00000383966 129 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 RNA5SP306-201ENST00000411087 107 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 RNA5SP107-201ENST00000411358 122 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 AL807761.1-201ENST00000417622 171 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.78□□□□□ -1.64
HMGB1P09429 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.78□□□□□ -1.64
HMGB1P09429 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P09429 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P09429 RPL31P61-201ENST00000496160 376 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB1P09429 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.78□□□□□ -1.64
HMGB1P09429 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.78□□□□□ -1.64
HMGB1P09429 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P09429 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.78□□□□□ -1.64
HMGB1P09429 CYCSP29-201ENST00000533731 318 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB1P09429 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB1P09429 DUXAP6-201ENST00000553858 601 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.78□□□□□ -1.64
HMGB1P09429 GNRHR2P1-201ENST00000555315 631 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 MIR3186-201ENST00000577404 85 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 AC023575.1-201ENST00000580510 358 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 AC015726.1-201ENST00000602353 681 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 AC009159.2-201ENST00000617603 606 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 AC092628.2-201ENST00000622492 339 ntBASIC4.78□□□□□ -1.64
HMGB1P09429 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB1P09429 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.78□□□□□ -1.64
HMGB1P09429 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HMGB1P09429 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HMGB1P09429 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HMGB1P09429 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB1P09429 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB1P09429 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGB1P09429 RPL23AP39-201ENST00000415533 405 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB1P09429 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGB1P09429 AC011742.1-201ENST00000431448 434 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGB1P09429 AC129850.1-201ENST00000436203 508 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 AL049734.2-201ENST00000441066 616 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 BNIP3P2-201ENST00000441221 577 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 RPS20P22-201ENST00000473700 357 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 RPL23AP41-201ENST00000484754 458 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGB1P09429 NPM1P41-201ENST00000512920 831 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 SNORA31.21-201ENST00000517180 77 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGB1P09429 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGB1P09429 AP000926.4-201ENST00000527351 454 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 AC007115.1-201ENST00000546853 234 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 AC093012.1-202ENST00000549403 582 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 GTF2IP22-201ENST00000554443 182 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 AC090888.1-201ENST00000561335 1141 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 AC009094.1-201ENST00000564443 426 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 AC002400.1-201ENST00000569310 726 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGB1P09429 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGB1P09429 BNIP3P38-201ENST00000601117 544 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 AL355472.4-201ENST00000610233 626 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 MIR6716-201ENST00000613413 80 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 MLECP1-201ENST00000615893 709 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 AC131159.1-201ENST00000621854 213 ntBASIC4.77□□□□□ -1.65
HMGB1P09429 ZNF962P-201ENST00000443465 3140 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms