Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC087190.1-201ENST00000484462 480 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 TBCAP3-201ENST00000512475 312 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.17□□□□□ -2.06
COL4A2P08572 HSPE1P18-201ENST00000517602 280 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.17□□□□□ -2.06
COL4A2P08572 OR4R2P-201ENST00000530815 597 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A2P08572 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL4A2P08572 AC060766.3-201ENST00000591442 263 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AC011494.1-201ENST00000596454 237 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AC083899.3-201ENST00000603413 594 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AP003117.2-201ENST00000606010 545 ntBASIC2.17□□□□□ -2.06
COL4A2P08572 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.17□□□□□ -2.06
COL4A2P08572 NSRP1P1-201ENST00000444067 1693 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL4A2P08572 RNA5SP391-201ENST00000363456 119 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 SNORA67.3-201ENST00000384366 140 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.16□□□□□ -2.06
COL4A2P08572 AC092832.1-201ENST00000422934 400 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 ISCA1P6-201ENST00000427740 390 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.16□□□□□ -2.06
COL4A2P08572 AC097499.1-201ENST00000444277 208 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.16□□□□□ -2.06
COL4A2P08572 AL035407.2-201ENST00000454090 378 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 AC132942.1-201ENST00000486753 483 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.16□□□□□ -2.06
COL4A2P08572 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.16□□□□□ -2.06
COL4A2P08572 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.16□□□□□ -2.06
COL4A2P08572 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.16□□□□□ -2.06
COL4A2P08572 MAGOH2P-202ENST00000584384 429 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 AP000787.2-201ENST00000604432 568 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 C2orf27A-204ENST00000623058 969 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 FAM157B-203ENST00000639350 358 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 AL161431.1-201ENST00000618966 4205 ntBASIC2.16□□□□□ -2.06
COL4A2P08572 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
COL4A2P08572 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
COL4A2P08572 AC131280.1-202ENST00000624067 4211 ntBASIC2.15□□□□□ -2.06
COL4A2P08572 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
COL4A2P08572 OR5T3-201ENST00000303059 1023 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 MTATP6P31-201ENST00000406985 692 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 TATDN1P1-201ENST00000414123 891 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 LINC01347-201ENST00000417964 355 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 RPL7P53-201ENST00000421245 739 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 AC005517.2-201ENST00000424673 553 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.15□□□□□ -2.07
COL4A2P08572 AC004866.2-201ENST00000438285 481 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 AC007677.1-201ENST00000445757 515 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 AL118520.1-201ENST00000450770 291 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 AC027673.1-201ENST00000456245 405 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 RN7SKP210-201ENST00000459176 261 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.15□□□□□ -2.07
COL4A2P08572 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.15□□□□□ -2.07
COL4A2P08572 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.15□□□□□ -2.07
COL4A2P08572 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.15□□□□□ -2.07
COL4A2P08572 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.15□□□□□ -2.07
COL4A2P08572 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.15□□□□□ -2.07
COL4A2P08572 OR4H6P-202ENST00000603819 340 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 RNA5SP108-201ENST00000605921 117 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 U6.98-201ENST00000637157 84 ntBASIC2.15□□□□□ -2.07
COL4A2P08572 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL4A2P08572 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
COL4A2P08572 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL4A2P08572 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
COL4A2P08572 RNA5SP27-201ENST00000363839 119 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.14□□□□□ -2.07
COL4A2P08572 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL4A2P08572 HMGB1P10-201ENST00000395823 563 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
COL4A2P08572 BTBD10P2-201ENST00000404779 676 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 U3.37-201ENST00000408528 213 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AL592045.1-201ENST00000429867 352 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 TRBV26-201ENST00000456572 344 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AC096992.1-201ENST00000459808 709 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AC072039.1-201ENST00000477611 581 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.14□□□□□ -2.07
COL4A2P08572 RN7SKP277-201ENST00000516895 283 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 RNU6-295P-201ENST00000516901 104 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.14□□□□□ -2.07
COL4A2P08572 MIR6864-201ENST00000617935 70 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL4A2P08572 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.14□□□□□ -2.07
COL4A2P08572 SNORA50A-202ENST00000629536 136 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 U6.107-201ENST00000637108 79 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL4A2P08572 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL4A2P08572 ZNF271P-202ENST00000465539 1970 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL4A2P08572 Y_RNA.4-201ENST00000362333 112 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 RNU6-252P-201ENST00000363232 107 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 Y_RNA.238-201ENST00000364441 102 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 RNU1-51P-201ENST00000365345 176 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.14□□□□□ -2.07
COL4A2P08572 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.14□□□□□ -2.07
COL4A2P08572 AL513321.1-201ENST00000441175 761 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 HMGB1P48-201ENST00000446155 598 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AL359893.1-201ENST00000447628 1580 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AC104689.1-201ENST00000473356 768 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 AC087385.1-201ENST00000475062 312 ntBASIC2.14□□□□□ -2.07
COL4A2P08572 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.14□□□□□ -2.07
COL4A2P08572 AC110792.2-201ENST00000510278 224 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms