Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC013468.1-201ENST00000608680 598 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AC009159.1-201ENST00000618386 642 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 AL360181.4-201ENST00000621752 134 ntBASIC2.35□□□□□ -2.03
HLA-DQB2P05538 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DQB2P05538 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 RNU6-1339P-201ENST00000363574 91 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 OR5H15-201ENST00000383696 930 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 ATP5F1P6-201ENST00000402768 767 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 FNDC3CP-201ENST00000420795 1155 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 MTATP6P11-201ENST00000428071 670 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 ZNF965P-201ENST00000432501 817 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 SNRPEP4-201ENST00000435815 279 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 DNAJC19P8-201ENST00000452887 259 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 RNA5SP24-201ENST00000516478 95 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 AC027309.2-201ENST00000520566 192 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 AC078814.3-201ENST00000553036 491 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 AC105137.2-201ENST00000569073 466 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 FRG1HP-204ENST00000617940 757 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 AC068620.4-201ENST00000636730 1182 ntBASIC2.34□□□□□ -2.03
HLA-DQB2P05538 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.34□□□□□ -2.03
HLA-DQB2P05538 SEC63P2-201ENST00000503863 1939 ntBASIC2.34□□□□□ -2.04
HLA-DQB2P05538 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AC006020.1-201ENST00000420179 1854 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 RNU4-82P-201ENST00000362443 140 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 RNU6-1249P-201ENST00000363237 111 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 Y_RNA.111-201ENST00000363248 100 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 RNU6-444P-201ENST00000383988 108 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 RNU6-441P-201ENST00000384545 106 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 RNA5SP38-201ENST00000410750 119 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 PAICSP7-201ENST00000419829 962 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 RPL21P32-201ENST00000419877 477 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AC005189.1-201ENST00000431286 310 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AL513321.1-201ENST00000441175 761 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 UBE2DNL-203ENST00000474922 222 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AC096751.1-202ENST00000502691 1067 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AIG1P1-201ENST00000503376 148 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 RNA5SP281-201ENST00000516504 135 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 RNU6-551P-201ENST00000516661 103 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AC106734.1-201ENST00000568646 663 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AC025588.3-201ENST00000604182 274 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 DPRXP5-201ENST00000604662 539 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 HSPE1P14-201ENST00000605812 302 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AC021851.1-201ENST00000608537 1082 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AL355810.1-201ENST00000614629 552 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AC090116.1-201ENST00000615679 446 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 MIR6766-201ENST00000622641 72 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 AC095031.1-201ENST00000623685 672 ntBASIC2.33□□□□□ -2.04
HLA-DQB2P05538 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
HLA-DQB2P05538 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 SGO1P2-201ENST00000429458 1589 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 RNU6-1027P-201ENST00000383998 107 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 FO393413.1-201ENST00000402892 195 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AL591416.1-201ENST00000404015 867 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HLA-DQB2P05538 TRBV26-201ENST00000456572 344 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 RPS29P12-201ENST00000460178 152 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 HSPE1P6-201ENST00000479457 291 ntBASIC2.32□□□□□ -2.04
HLA-DQB2P05538 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms