Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.7□□□□□ -2.14
SPTA1P02549 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.7□□□□□ -2.14
SPTA1P02549 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SPTA1P02549 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.7□□□□□ -2.14
SPTA1P02549 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.7□□□□□ -2.14
SPTA1P02549 MIR3186-201ENST00000577404 85 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.7□□□□□ -2.14
SPTA1P02549 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SPTA1P02549 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SPTA1P02549 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SPTA1P02549 RBBP8P1-201ENST00000449447 1844 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SPTA1P02549 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SPTA1P02549 RN7SKP123-201ENST00000410732 291 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.7□□□□□ -2.14
SPTA1P02549 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.7□□□□□ -2.14
SPTA1P02549 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.7□□□□□ -2.14
SPTA1P02549 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.7□□□□□ -2.14
SPTA1P02549 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.7□□□□□ -2.14
SPTA1P02549 FAM92A1P1-201ENST00000528023 890 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 AC006254.3-201ENST00000603353 884 ntBASIC1.7□□□□□ -2.14
SPTA1P02549 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SPTA1P02549 MTND5P12-201ENST00000502851 1449 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 DEFB109C-201ENST00000382575 264 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 DEFB109B-201ENST00000382656 264 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 RNU1-138P-201ENST00000384093 164 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 AL358453.1-201ENST00000422522 250 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 AC244033.1-201ENST00000426826 870 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SPTA1P02549 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.69□□□□□ -2.14
SPTA1P02549 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.69□□□□□ -2.14
SPTA1P02549 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.69□□□□□ -2.14
SPTA1P02549 RPL23AP61-201ENST00000623642 466 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 AC103988.1-201ENST00000566382 2177 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.69□□□□□ -2.14
SPTA1P02549 DNAJC19P6-201ENST00000401853 280 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 RPL23AP62-201ENST00000463396 453 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 AC107015.1-201ENST00000466902 747 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 RPL21P18-201ENST00000469899 480 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 RPL23AP44-201ENST00000482216 473 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SPTA1P02549 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 RNA5SP337-201ENST00000517007 109 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 OR4P1P-201ENST00000530808 1136 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 AC007536.1-201ENST00000533382 349 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 AL161670.1-201ENST00000554348 137 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.69□□□□□ -2.14
SPTA1P02549 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.69□□□□□ -2.14
SPTA1P02549 AC009314.1-201ENST00000603871 304 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 AC002487.1-201ENST00000604565 994 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.69□□□□□ -2.14
SPTA1P02549 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.69□□□□□ -2.14
SPTA1P02549 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.69□□□□□ -2.14
SPTA1P02549 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.69□□□□□ -2.14
SPTA1P02549 SEPT7P7-201ENST00000420492 1301 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.68□□□□□ -2.14
SPTA1P02549 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.68□□□□□ -2.14
SPTA1P02549 MTCO1P4-201ENST00000520516 1409 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 HMGB1P11-201ENST00000413899 637 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 USP9YP8-201ENST00000441913 500 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 PIGFP3-201ENST00000441918 722 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.68□□□□□ -2.14
SPTA1P02549 RPS29P12-201ENST00000460178 152 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.68□□□□□ -2.14
SPTA1P02549 OR4G1P-201ENST00000588632 938 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 AC008687.2-201ENST00000597865 520 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 AC016727.2-201ENST00000603988 621 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 VN1R7P-201ENST00000619242 903 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.68□□□□□ -2.14
SPTA1P02549 AC010329.2-201ENST00000595195 2737 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
SPTA1P02549 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SPTA1P02549 GSTA12P-201ENST00000402398 508 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.68□□□□□ -2.14
SPTA1P02549 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.68□□□□□ -2.14
SPTA1P02549 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.68□□□□□ -2.14
SPTA1P02549 AC114801.2-201ENST00000503825 781 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 AC109471.1-201ENST00000511631 612 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 RNA5SP476-201ENST00000516613 103 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 COX6CP5-201ENST00000527162 228 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 AC087241.2-201ENST00000535801 324 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 AC011712.1-201ENST00000588959 234 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.68□□□□□ -2.14
SPTA1P02549 AL031274.2-201ENST00000599419 203 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 AC136443.5-201ENST00000603741 370 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 SNRPGP19-201ENST00000603826 189 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 AL035411.2-201ENST00000604022 421 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 AC007620.3-201ENST00000608131 497 ntBASIC1.68□□□□□ -2.14
SPTA1P02549 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.68□□□□□ -2.14
SPTA1P02549 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SPTA1P02549 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SPTA1P02549 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SPTA1P02549 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.67□□□□□ -2.14
SPTA1P02549 RNA5SP181-201ENST00000410246 98 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 AL136133.1-201ENST00000413694 376 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 RPL7P53-201ENST00000421245 739 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 MTCO3P30-201ENST00000426425 670 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 TRIAP1P1-201ENST00000427062 225 ntBASIC1.67□□□□□ -2.14
SPTA1P02549 SAR1AP4-201ENST00000429225 591 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms