Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
COL4A1P02462 AC007256.1-201ENST00000392253 2765 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A1P02462 RNU4-7P-201ENST00000364758 141 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 RNA5SP167-201ENST00000365461 116 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 TOMM22P1-201ENST00000418578 312 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.22□□□□□ -2.05
COL4A1P02462 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A1P02462 MTCYBP31-201ENST00000438855 1122 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.22□□□□□ -2.05
COL4A1P02462 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.22□□□□□ -2.05
COL4A1P02462 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.22□□□□□ -2.05
COL4A1P02462 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.22□□□□□ -2.05
COL4A1P02462 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A1P02462 RNA5SP182-201ENST00000516064 82 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.22□□□□□ -2.05
COL4A1P02462 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A1P02462 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.22□□□□□ -2.05
COL4A1P02462 AC099778.2-201ENST00000610904 211 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.22□□□□□ -2.05
COL4A1P02462 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.22□□□□□ -2.05
COL4A1P02462 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.22□□□□□ -2.05
COL4A1P02462 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.22□□□□□ -2.05
COL4A1P02462 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A1P02462 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.22□□□□□ -2.05
COL4A1P02462 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A1P02462 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A1P02462 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
COL4A1P02462 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A1P02462 RNU6-386P-201ENST00000362650 107 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 RNU4-23P-201ENST00000362839 140 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 SNORA51.11-201ENST00000384442 131 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 MIR1323-201ENST00000408090 73 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A1P02462 XKRYP6-201ENST00000440468 1116 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 XKRYP3-201ENST00000442113 1116 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 AC025033.1-201ENST00000463883 194 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.22□□□□□ -2.05
COL4A1P02462 CBX3P4-201ENST00000538909 354 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 PRELID2P1-201ENST00000552837 301 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A1P02462 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A1P02462 AC018754.1-201ENST00000607486 925 ntBASIC2.22□□□□□ -2.05
COL4A1P02462 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.05
COL4A1P02462 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 SET-203ENST00000372688 801 ntTSL 2 BASIC2.21□□□□□ -2.06
COL4A1P02462 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
COL4A1P02462 MTND4LP13-201ENST00000425022 298 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 WARS2P1-201ENST00000429678 537 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.21□□□□□ -2.06
COL4A1P02462 RAD1P2-201ENST00000446414 663 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 AP000873.1-201ENST00000463987 400 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 AC078918.1-201ENST00000498515 228 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 RN7SKP82-201ENST00000516786 223 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.21□□□□□ -2.06
COL4A1P02462 DNAJC19P9-201ENST00000555084 351 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 AC005951.1-201ENST00000576706 485 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
COL4A1P02462 AC092159.4-201ENST00000624944 550 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.21□□□□□ -2.06
COL4A1P02462 MIR4278-201ENST00000636094 69 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 AC138649.5-201ENST00000637456 137 ntBASIC2.21□□□□□ -2.06
COL4A1P02462 AC010329.2-201ENST00000595195 2737 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
COL4A1P02462 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A1P02462 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.2□□□□□ -2.06
COL4A1P02462 MIR378A-201ENST00000362177 66 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 RNU6-819P-201ENST00000364116 107 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 AL021407.1-201ENST00000404531 386 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.2□□□□□ -2.06
COL4A1P02462 AC048351.1-201ENST00000420064 602 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 RPL23AP20-201ENST00000447965 421 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 AC009961.3-201ENST00000449832 765 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 SNRPGP3-201ENST00000469405 227 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 AC092451.1-201ENST00000480211 153 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.2□□□□□ -2.06
COL4A1P02462 OR8X1P-201ENST00000534542 869 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 AL391597.1-201ENST00000618707 694 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.2□□□□□ -2.06
COL4A1P02462 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
COL4A1P02462 MFSD8-245ENST00000641743 948 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A1P02462 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
COL4A1P02462 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL4A1P02462 MTCO1P6-201ENST00000481192 1384 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 AC007342.9-201ENST00000623877 1385 ntBASIC2.2□□□□□ -2.06
COL4A1P02462 KPNA2P1-201ENST00000458289 1591 ntBASIC2.19□□□□□ -2.06
COL4A1P02462 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
COL4A1P02462 U3.15-201ENST00000365398 212 ntBASIC2.19□□□□□ -2.06
COL4A1P02462 HIGD1AP11-201ENST00000438361 280 ntBASIC2.19□□□□□ -2.06
COL4A1P02462 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.19□□□□□ -2.06
COL4A1P02462 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.19□□□□□ -2.06
COL4A1P02462 BUD31P2-201ENST00000449374 300 ntBASIC2.19□□□□□ -2.06
COL4A1P02462 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.19□□□□□ -2.06
COL4A1P02462 AC011352.3-201ENST00000505162 593 ntBASIC2.19□□□□□ -2.06
COL4A1P02462 SNX5P1-201ENST00000505757 1041 ntBASIC2.19□□□□□ -2.06
COL4A1P02462 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
COL4A1P02462 RNU6-319P-201ENST00000516025 108 ntBASIC2.19□□□□□ -2.06
COL4A1P02462 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.19□□□□□ -2.06
COL4A1P02462 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms