Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC018630.2-202ENST00000422992 927 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC245028.1-201ENST00000423259 256 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 COX6CP13-201ENST00000428703 226 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AL590233.1-201ENST00000430017 456 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 RPL34P6-201ENST00000432390 345 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC108734.1-201ENST00000439549 399 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.52□□□□□ -1.69
CNOT4O95628 NANOGP10-201ENST00000453325 895 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC133473.1-201ENST00000455173 299 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.52□□□□□ -1.69
CNOT4O95628 RN7SL443P-201ENST00000464331 290 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC092324.1-201ENST00000468671 324 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 RPL21P99-201ENST00000480369 423 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 RN7SL441P-201ENST00000492388 296 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.52□□□□□ -1.69
CNOT4O95628 MTCO1P29-201ENST00000496868 288 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.52□□□□□ -1.69
CNOT4O95628 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.52□□□□□ -1.69
CNOT4O95628 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.52□□□□□ -1.69
CNOT4O95628 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.52□□□□□ -1.69
CNOT4O95628 COX6B1P5-201ENST00000509843 249 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC005741.1-201ENST00000511094 432 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC023141.12-201ENST00000512399 199 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 RPL7P20-201ENST00000520308 745 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.52□□□□□ -1.69
CNOT4O95628 EDDM3DP-201ENST00000554692 434 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC060771.1-201ENST00000582031 164 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.52□□□□□ -1.69
CNOT4O95628 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.52□□□□□ -1.69
CNOT4O95628 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.52□□□□□ -1.69
CNOT4O95628 DPPA3P3-201ENST00000603842 430 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC016925.2-201ENST00000605108 242 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AL080274.1-201ENST00000605565 220 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC006329.2-201ENST00000611491 394 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC084781.2-201ENST00000615568 161 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AL158196.1-201ENST00000616786 434 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 AC091905.4-201ENST00000623432 202 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 MTND4LP32-201ENST00000636111 270 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNOT4O95628 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNOT4O95628 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNOT4O95628 THAP12P5-201ENST00000405864 2275 ntBASIC4.52□□□□□ -1.69
CNOT4O95628 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.52□□□□□ -1.69
CNOT4O95628 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.52□□□□□ -1.69
CNOT4O95628 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNOT4O95628 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT4O95628 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.51□□□□□ -1.69
CNOT4O95628 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT4O95628 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CNOT4O95628 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT4O95628 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT4O95628 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT4O95628 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT4O95628 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
CNOT4O95628 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.51□□□□□ -1.69
CNOT4O95628 OR5P1P-201ENST00000299512 925 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 RNU6-97P-201ENST00000363387 104 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 Y_RNA.234-201ENST00000364409 97 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 RNU6-463P-201ENST00000384340 107 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 SNORD116-29-201ENST00000384516 83 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 U3.20-201ENST00000390909 217 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AC245054.2-201ENST00000415639 319 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.51□□□□□ -1.69
CNOT4O95628 HMGN2P21-201ENST00000447764 270 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 snoU13.8-201ENST00000458890 104 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 Y_RNA.635-201ENST00000459041 101 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AC004062.1-201ENST00000509926 645 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 FAM206BP-201ENST00000510179 541 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.51□□□□□ -1.69
CNOT4O95628 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.51□□□□□ -1.69
CNOT4O95628 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.51□□□□□ -1.69
CNOT4O95628 AC093012.1-202ENST00000549403 582 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 SETP2-201ENST00000553886 926 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 RPL21P12-201ENST00000559810 515 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.51□□□□□ -1.69
CNOT4O95628 MIR4697-201ENST00000582977 78 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.51□□□□□ -1.69
CNOT4O95628 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.51□□□□□ -1.69
CNOT4O95628 AC011487.3-201ENST00000593607 453 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AL627309.6-201ENST00000606857 840 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AC004908.2-201ENST00000609090 574 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AC093799.2-201ENST00000610062 578 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.51□□□□□ -1.69
CNOT4O95628 uc_338.18-201ENST00000615451 175 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AC004825.2-201ENST00000616634 455 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AL078596.1-201ENST00000624856 447 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AL159972.1-201ENST00000625150 448 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CNOT4O95628 INTS6P1-201ENST00000504674 2530 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT4O95628 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT4O95628 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT4O95628 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.51□□□□□ -1.69
CNOT4O95628 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNOT4O95628 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CNOT4O95628 MTND5P1-201ENST00000445440 1375 ntBASIC4.51□□□□□ -1.69
CNOT4O95628 AC011460.1-201ENST00000636268 1834 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms