Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SNORD56.5-201ENST00000364281 72 ntBASIC2.64□□□□□ -1.99
VAPBO95292 RNU6-650P-201ENST00000365658 111 ntBASIC2.64□□□□□ -1.99
VAPBO95292 DEFA7P-201ENST00000382676 285 ntBASIC2.64□□□□□ -1.99
VAPBO95292 AL356057.3-201ENST00000402607 340 ntBASIC2.64□□□□□ -1.99
VAPBO95292 RPS20P25-201ENST00000412447 352 ntBASIC2.64□□□□□ -1.99
VAPBO95292 AL137014.1-201ENST00000420490 1226 ntBASIC2.64□□□□□ -1.99
VAPBO95292 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.64□□□□□ -1.99
VAPBO95292 RPL7P44-201ENST00000424827 742 ntBASIC2.64□□□□□ -1.99
VAPBO95292 UBBP3-201ENST00000445497 241 ntBASIC2.64□□□□□ -1.99
VAPBO95292 RPL7P55-201ENST00000450522 746 ntBASIC2.64□□□□□ -1.99
VAPBO95292 SNRPGP6-201ENST00000451124 220 ntBASIC2.64□□□□□ -1.99
VAPBO95292 CACYBPP2-201ENST00000453625 678 ntBASIC2.64□□□□□ -1.99
VAPBO95292 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.64□□□□□ -1.99
VAPBO95292 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.64□□□□□ -1.99
VAPBO95292 AC048346.1-201ENST00000510247 144 ntBASIC2.64□□□□□ -1.99
VAPBO95292 AC087373.1-201ENST00000524920 491 ntBASIC2.64□□□□□ -1.99
VAPBO95292 AP003102.1-201ENST00000525638 661 ntBASIC2.64□□□□□ -1.99
VAPBO95292 AP000867.2-201ENST00000532468 320 ntBASIC2.64□□□□□ -1.99
VAPBO95292 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.64□□□□□ -1.99
VAPBO95292 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.64□□□□□ -1.99
VAPBO95292 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.64□□□□□ -1.99
VAPBO95292 AC125611.2-201ENST00000551907 647 ntBASIC2.64□□□□□ -1.99
VAPBO95292 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.64□□□□□ -1.99
VAPBO95292 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.64□□□□□ -1.99
VAPBO95292 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.64□□□□□ -1.99
VAPBO95292 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.64□□□□□ -1.99
VAPBO95292 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.64□□□□□ -1.99
VAPBO95292 AL161756.2-201ENST00000604597 246 ntBASIC2.64□□□□□ -1.99
VAPBO95292 AC091925.2-201ENST00000625059 256 ntBASIC2.64□□□□□ -1.99
VAPBO95292 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.64□□□□□ -1.99
VAPBO95292 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.64□□□□□ -1.99
VAPBO95292 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VAPBO95292 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VAPBO95292 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VAPBO95292 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VAPBO95292 VTRNA1-1-201ENST00000363120 99 ntBASIC2.63□□□□□ -1.99
VAPBO95292 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VAPBO95292 MIR9-1-201ENST00000385198 89 ntBASIC2.63□□□□□ -1.99
VAPBO95292 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VAPBO95292 MTCO2P31-201ENST00000402702 684 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AL136372.1-201ENST00000403060 228 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AL139098.1-201ENST00000407291 389 ntBASIC2.63□□□□□ -1.99
VAPBO95292 RNA5SP492-201ENST00000411330 114 ntBASIC2.63□□□□□ -1.99
VAPBO95292 RPL19P1-201ENST00000411635 428 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.63□□□□□ -1.99
VAPBO95292 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.63□□□□□ -1.99
VAPBO95292 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.63□□□□□ -1.99
VAPBO95292 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.63□□□□□ -1.99
VAPBO95292 AC105272.1-201ENST00000438604 198 ntBASIC2.63□□□□□ -1.99
VAPBO95292 CYCSP32-201ENST00000440548 321 ntBASIC2.63□□□□□ -1.99
VAPBO95292 SETP11-201ENST00000473027 690 ntBASIC2.63□□□□□ -1.99
VAPBO95292 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VAPBO95292 RPL21P131-201ENST00000497298 483 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.63□□□□□ -1.99
VAPBO95292 AC090136.1-201ENST00000520009 240 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AC087272.1-201ENST00000523624 533 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.63□□□□□ -1.99
VAPBO95292 HSPE1P20-201ENST00000538133 289 ntBASIC2.63□□□□□ -1.99
VAPBO95292 OR7K1P-201ENST00000546439 926 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.63□□□□□ -1.99
VAPBO95292 NBEAP1-201ENST00000554452 979 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AADACP1-206ENST00000561502 1193 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AC011260.1-201ENST00000578420 472 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AC138761.3-201ENST00000579993 334 ntBASIC2.63□□□□□ -1.99
VAPBO95292 MIR3200-201ENST00000580767 85 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.63□□□□□ -1.99
VAPBO95292 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.63□□□□□ -1.99
VAPBO95292 AC020895.1-201ENST00000595362 272 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AL356575.1-201ENST00000603008 283 ntBASIC2.63□□□□□ -1.99
VAPBO95292 U73023.1-201ENST00000603134 700 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AL022099.1-201ENST00000604551 712 ntBASIC2.63□□□□□ -1.99
VAPBO95292 HSPE1P7-201ENST00000604681 321 ntBASIC2.63□□□□□ -1.99
VAPBO95292 AL590396.4-201ENST00000636779 956 ntBASIC2.63□□□□□ -1.99
VAPBO95292 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VAPBO95292 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
VAPBO95292 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.63□□□□□ -1.99
VAPBO95292 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
VAPBO95292 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VAPBO95292 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.62□□□□□ -1.99
VAPBO95292 RNU6-619P-201ENST00000365146 108 ntBASIC2.62□□□□□ -1.99
VAPBO95292 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.62□□□□□ -1.99
VAPBO95292 SNORA9-201ENST00000384215 133 ntBASIC2.62□□□□□ -1.99
VAPBO95292 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VAPBO95292 SNORD65C-201ENST00000390962 71 ntBASIC2.62□□□□□ -1.99
VAPBO95292 AL360182.1-201ENST00000397433 468 ntBASIC2.62□□□□□ -1.99
VAPBO95292 AL139095.1-201ENST00000404326 391 ntBASIC2.62□□□□□ -1.99
VAPBO95292 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.62□□□□□ -1.99
VAPBO95292 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VAPBO95292 RAP1BP1-201ENST00000412709 553 ntBASIC2.62□□□□□ -1.99
VAPBO95292 USP9YP20-201ENST00000419224 558 ntBASIC2.62□□□□□ -1.99
VAPBO95292 HMGN2P30-201ENST00000423237 256 ntBASIC2.62□□□□□ -1.99
VAPBO95292 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.62□□□□□ -1.99
VAPBO95292 AC011816.1-201ENST00000441346 546 ntBASIC2.62□□□□□ -1.99
VAPBO95292 AL121871.1-201ENST00000443413 436 ntBASIC2.62□□□□□ -1.99
VAPBO95292 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.62□□□□□ -1.99
VAPBO95292 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.62□□□□□ -1.99
VAPBO95292 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.62□□□□□ -1.99
VAPBO95292 GTF2IP12-201ENST00000456547 356 ntBASIC2.62□□□□□ -1.99
VAPBO95292 AC092798.1-201ENST00000458542 409 ntBASIC2.62□□□□□ -1.99
VAPBO95292 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms