Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC004486.1-201ENST00000546846 233 ntBASIC3.25□□□□□ -1.89
PCF11O94913 RMST_5.1-201ENST00000618704 126 ntBASIC3.25□□□□□ -1.89
PCF11O94913 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.24□□□□□ -1.89
PCF11O94913 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCF11O94913 RNU6-532P-201ENST00000384318 107 ntBASIC3.24□□□□□ -1.89
PCF11O94913 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
PCF11O94913 RPS7P5-201ENST00000441482 581 ntBASIC3.24□□□□□ -1.89
PCF11O94913 OR5D17P-201ENST00000531492 978 ntBASIC3.24□□□□□ -1.89
PCF11O94913 ZNF192P1-203ENST00000565888 810 ntBASIC3.24□□□□□ -1.89
PCF11O94913 LLPHP1-201ENST00000603571 367 ntBASIC3.24□□□□□ -1.89
PCF11O94913 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCF11O94913 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCF11O94913 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCF11O94913 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCF11O94913 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PCF11O94913 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCF11O94913 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCF11O94913 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.23□□□□□ -1.89
PCF11O94913 RNU6-666P-201ENST00000363499 107 ntBASIC3.23□□□□□ -1.89
PCF11O94913 AC240504.1-201ENST00000395709 845 ntBASIC3.23□□□□□ -1.89
PCF11O94913 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.23□□□□□ -1.89
PCF11O94913 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.23□□□□□ -1.89
PCF11O94913 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.23□□□□□ -1.89
PCF11O94913 USP9YP8-201ENST00000441913 500 ntBASIC3.23□□□□□ -1.89
PCF11O94913 RPL39P40-201ENST00000445481 146 ntBASIC3.23□□□□□ -1.89
PCF11O94913 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.23□□□□□ -1.89
PCF11O94913 SUB1P3-201ENST00000564581 315 ntBASIC3.23□□□□□ -1.89
PCF11O94913 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.23□□□□□ -1.89
PCF11O94913 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCF11O94913 SNORD114-26-201ENST00000363543 72 ntBASIC3.22□□□□□ -1.89
PCF11O94913 RNU6-1251P-201ENST00000364502 107 ntBASIC3.22□□□□□ -1.89
PCF11O94913 RNU4-62P-201ENST00000410125 130 ntBASIC3.22□□□□□ -1.89
PCF11O94913 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.22□□□□□ -1.89
PCF11O94913 TPMTP4-201ENST00000450749 678 ntBASIC3.22□□□□□ -1.89
PCF11O94913 AC233279.1-201ENST00000455300 423 ntBASIC3.22□□□□□ -1.89
PCF11O94913 AC008571.1-201ENST00000467232 300 ntBASIC3.22□□□□□ -1.89
PCF11O94913 SNRPGP3-201ENST00000469405 227 ntBASIC3.22□□□□□ -1.89
PCF11O94913 MTATP6P22-201ENST00000507369 598 ntBASIC3.22□□□□□ -1.89
PCF11O94913 RN7SKP234-201ENST00000517173 224 ntBASIC3.22□□□□□ -1.89
PCF11O94913 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.22□□□□□ -1.89
PCF11O94913 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.22□□□□□ -1.89
PCF11O94913 AP001542.2-201ENST00000593141 364 ntBASIC3.22□□□□□ -1.89
PCF11O94913 AC120053.1-201ENST00000607706 736 ntBASIC3.22□□□□□ -1.89
PCF11O94913 AC116563.2-201ENST00000624751 535 ntBASIC3.22□□□□□ -1.89
PCF11O94913 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.22□□□□□ -1.89
PCF11O94913 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.22□□□□□ -1.89
PCF11O94913 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.22□□□□□ -1.89
PCF11O94913 SNORA31-201ENST00000362607 130 ntBASIC3.21□□□□□ -1.89
PCF11O94913 RNA5SP189-201ENST00000364920 115 ntBASIC3.21□□□□□ -1.89
PCF11O94913 MIR153-1-201ENST00000384914 90 ntBASIC3.21□□□□□ -1.89
PCF11O94913 AC005005.2-201ENST00000420779 380 ntBASIC3.21□□□□□ -1.89
PCF11O94913 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.21□□□□□ -1.89
PCF11O94913 SDR42E1P3-201ENST00000438345 502 ntBASIC3.21□□□□□ -1.89
PCF11O94913 AC092798.1-201ENST00000458542 409 ntBASIC3.21□□□□□ -1.89
PCF11O94913 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.21□□□□□ -1.89
PCF11O94913 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.21□□□□□ -1.89
PCF11O94913 AC073387.2-201ENST00000604797 784 ntBASIC3.21□□□□□ -1.89
PCF11O94913 AC091834.1-201ENST00000614543 472 ntBASIC3.21□□□□□ -1.89
PCF11O94913 AC121761.2-201ENST00000617300 689 ntBASIC3.21□□□□□ -1.89
PCF11O94913 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.21□□□□□ -1.9
PCF11O94913 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PCF11O94913 AL445646.1-201ENST00000431784 216 ntBASIC3.21□□□□□ -1.9
PCF11O94913 UBE2V2P1-201ENST00000434717 398 ntBASIC3.21□□□□□ -1.9
PCF11O94913 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.21□□□□□ -1.9
PCF11O94913 AL445669.2-201ENST00000454425 421 ntBASIC3.21□□□□□ -1.9
PCF11O94913 RPL12P25-201ENST00000455592 494 ntBASIC3.21□□□□□ -1.9
PCF11O94913 AC146507.1-201ENST00000468335 354 ntBASIC3.21□□□□□ -1.9
PCF11O94913 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.21□□□□□ -1.9
PCF11O94913 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.21□□□□□ -1.9
PCF11O94913 RNU6-826P-201ENST00000516827 104 ntBASIC3.21□□□□□ -1.9
PCF11O94913 AC025881.1-201ENST00000518851 512 ntBASIC3.21□□□□□ -1.9
PCF11O94913 FAM92A1P1-201ENST00000528023 890 ntBASIC3.21□□□□□ -1.9
PCF11O94913 AP000889.2-201ENST00000532684 490 ntBASIC3.21□□□□□ -1.9
PCF11O94913 AMZ2P1-203ENST00000565833 850 ntBASIC3.21□□□□□ -1.9
PCF11O94913 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.21□□□□□ -1.9
PCF11O94913 AL589994.2-201ENST00000621124 579 ntBASIC3.21□□□□□ -1.9
PCF11O94913 AC244517.12-201ENST00000623581 663 ntBASIC3.21□□□□□ -1.9
PCF11O94913 RN7SKP226-201ENST00000364912 300 ntBASIC3.2□□□□□ -1.9
PCF11O94913 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.2□□□□□ -1.9
PCF11O94913 AC007536.1-201ENST00000533382 349 ntBASIC3.2□□□□□ -1.9
PCF11O94913 AC087241.2-201ENST00000535801 324 ntBASIC3.2□□□□□ -1.9
PCF11O94913 OR6C73P-201ENST00000546432 358 ntBASIC3.2□□□□□ -1.9
PCF11O94913 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.2□□□□□ -1.9
PCF11O94913 AC002984.1-201ENST00000591692 448 ntBASIC3.2□□□□□ -1.9
PCF11O94913 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCF11O94913 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCF11O94913 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCF11O94913 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCF11O94913 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.19□□□□□ -1.9
PCF11O94913 MTCYBP31-201ENST00000438855 1122 ntBASIC3.19□□□□□ -1.9
PCF11O94913 AP001960.1-201ENST00000506494 658 ntBASIC3.19□□□□□ -1.9
PCF11O94913 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.19□□□□□ -1.9
PCF11O94913 RPL23AP61-201ENST00000623642 466 ntBASIC3.19□□□□□ -1.9
PCF11O94913 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
PCF11O94913 AC092447.7-201ENST00000422212 1621 ntBASIC3.18□□□□□ -1.9
PCF11O94913 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
PCF11O94913 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCF11O94913 RNU6-707P-201ENST00000364647 95 ntBASIC3.18□□□□□ -1.9
PCF11O94913 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.18□□□□□ -1.9
PCF11O94913 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms