Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCN2BO60939 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.55□□□□□ -2
SCN2BO60939 AC079600.2-201ENST00000550076 130 ntBASIC2.55□□□□□ -2
SCN2BO60939 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SCN2BO60939 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.55□□□□□ -2
SCN2BO60939 AC103810.1-201ENST00000579873 453 ntBASIC2.55□□□□□ -2
SCN2BO60939 AL451007.1-201ENST00000595491 289 ntBASIC2.55□□□□□ -2
SCN2BO60939 GAS5-AS1-201ENST00000602767 694 ntBASIC2.55□□□□□ -2
SCN2BO60939 AC008277.2-201ENST00000605196 797 ntBASIC2.55□□□□□ -2
SCN2BO60939 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SCN2BO60939 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.55□□□□□ -2
SCN2BO60939 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SCN2BO60939 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
SCN2BO60939 AC008568.2-201ENST00000623862 2313 ntBASIC2.54□□□□□ -2
SCN2BO60939 AC135776.4-201ENST00000624300 1904 ntBASIC2.54□□□□□ -2
SCN2BO60939 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCN2BO60939 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCN2BO60939 SNORA44-201ENST00000384584 132 ntBASIC2.54□□□□□ -2
SCN2BO60939 MIR128-1-201ENST00000384921 82 ntBASIC2.54□□□□□ -2
SCN2BO60939 AL138827.1-201ENST00000402666 306 ntBASIC2.54□□□□□ -2
SCN2BO60939 AL355615.1-201ENST00000406187 641 ntBASIC2.54□□□□□ -2
SCN2BO60939 SNORA11.1-201ENST00000408133 129 ntBASIC2.54□□□□□ -2
SCN2BO60939 RNU6-193P-201ENST00000410977 107 ntBASIC2.54□□□□□ -2
SCN2BO60939 RPS20P25-201ENST00000412447 352 ntBASIC2.54□□□□□ -2
SCN2BO60939 AL592148.1-201ENST00000413568 445 ntBASIC2.54□□□□□ -2
SCN2BO60939 OR51A3P-201ENST00000413596 924 ntBASIC2.54□□□□□ -2
SCN2BO60939 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.54□□□□□ -2
SCN2BO60939 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.54□□□□□ -2
SCN2BO60939 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.54□□□□□ -2
SCN2BO60939 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.54□□□□□ -2
SCN2BO60939 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.54□□□□□ -2
SCN2BO60939 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.54□□□□□ -2
SCN2BO60939 ARPC3P1-201ENST00000437218 533 ntBASIC2.54□□□□□ -2
SCN2BO60939 AL135938.1-201ENST00000443141 297 ntBASIC2.54□□□□□ -2
SCN2BO60939 AL929288.2-201ENST00000446368 407 ntBASIC2.54□□□□□ -2
SCN2BO60939 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.54□□□□□ -2
SCN2BO60939 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.54□□□□□ -2
SCN2BO60939 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.54□□□□□ -2
SCN2BO60939 PNPLA4P1-201ENST00000458328 305 ntBASIC2.54□□□□□ -2
SCN2BO60939 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCN2BO60939 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCN2BO60939 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.54□□□□□ -2
SCN2BO60939 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
SCN2BO60939 ARL2BPP5-201ENST00000523141 481 ntBASIC2.54□□□□□ -2
SCN2BO60939 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.54□□□□□ -2
SCN2BO60939 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.54□□□□□ -2
SCN2BO60939 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.54□□□□□ -2
SCN2BO60939 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.54□□□□□ -2
SCN2BO60939 AC060766.3-201ENST00000591442 263 ntBASIC2.54□□□□□ -2
SCN2BO60939 BNIP3P22-201ENST00000593399 556 ntBASIC2.54□□□□□ -2
SCN2BO60939 AL022099.1-201ENST00000604551 712 ntBASIC2.54□□□□□ -2
SCN2BO60939 AL161756.2-201ENST00000604597 246 ntBASIC2.54□□□□□ -2
SCN2BO60939 AC016911.1-201ENST00000613297 452 ntBASIC2.54□□□□□ -2
SCN2BO60939 AC004852.3-201ENST00000614131 326 ntBASIC2.54□□□□□ -2
SCN2BO60939 AC025588.4-201ENST00000615802 908 ntBASIC2.54□□□□□ -2
SCN2BO60939 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.54□□□□□ -2
SCN2BO60939 AP001002.2-201ENST00000625137 386 ntBASIC2.54□□□□□ -2
SCN2BO60939 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.54□□□□□ -2
SCN2BO60939 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.54□□□□□ -2
SCN2BO60939 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCN2BO60939 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SCN2BO60939 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SCN2BO60939 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.53□□□□□ -2
SCN2BO60939 SNORA48.2-201ENST00000390926 124 ntBASIC2.53□□□□□ -2
SCN2BO60939 ATF1P1-201ENST00000406040 927 ntBASIC2.53□□□□□ -2
SCN2BO60939 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.53□□□□□ -2
SCN2BO60939 RNA5SP21-201ENST00000410917 96 ntBASIC2.53□□□□□ -2
SCN2BO60939 AL096701.2-201ENST00000416920 238 ntBASIC2.53□□□□□ -2
SCN2BO60939 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.53□□□□□ -2
SCN2BO60939 AC010625.1-201ENST00000511296 403 ntBASIC2.53□□□□□ -2
SCN2BO60939 OR5BM1P-201ENST00000512021 366 ntBASIC2.53□□□□□ -2
SCN2BO60939 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.53□□□□□ -2
SCN2BO60939 RNU6-27P-201ENST00000516146 107 ntBASIC2.53□□□□□ -2
SCN2BO60939 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.53□□□□□ -2
SCN2BO60939 HMGB1P1-201ENST00000522557 636 ntBASIC2.53□□□□□ -2
SCN2BO60939 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.53□□□□□ -2
SCN2BO60939 AC123904.3-201ENST00000547218 814 ntBASIC2.53□□□□□ -2
SCN2BO60939 CKS1BP1-201ENST00000555221 240 ntBASIC2.53□□□□□ -2
SCN2BO60939 AC067805.1-201ENST00000559344 470 ntBASIC2.53□□□□□ -2
SCN2BO60939 SNORD39.3-201ENST00000584451 71 ntBASIC2.53□□□□□ -2
SCN2BO60939 RPL12P50-201ENST00000603116 116 ntBASIC2.53□□□□□ -2
SCN2BO60939 AL162233.1-201ENST00000620014 944 ntBASIC2.53□□□□□ -2
SCN2BO60939 AL137790.1-201ENST00000634283 177 ntBASIC2.53□□□□□ -2
SCN2BO60939 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.53□□□□□ -2
SCN2BO60939 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.53□□□□□ -2
SCN2BO60939 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
SCN2BO60939 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
SCN2BO60939 TAB3P1-202ENST00000452645 1634 ntBASIC2.53□□□□□ -2
SCN2BO60939 GDI2P1-201ENST00000429312 1336 ntBASIC2.52□□□□□ -2.01
SCN2BO60939 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.52□□□□□ -2.01
SCN2BO60939 RNU6-198P-201ENST00000384258 104 ntBASIC2.52□□□□□ -2.01
SCN2BO60939 SNORD51-201ENST00000384320 80 ntBASIC2.52□□□□□ -2.01
SCN2BO60939 RNU6-1197P-201ENST00000391183 107 ntBASIC2.52□□□□□ -2.01
SCN2BO60939 AL024474.1-201ENST00000404655 591 ntBASIC2.52□□□□□ -2.01
SCN2BO60939 MIR1290-201ENST00000408735 78 ntBASIC2.52□□□□□ -2.01
SCN2BO60939 RPL7P44-201ENST00000424827 742 ntBASIC2.52□□□□□ -2.01
SCN2BO60939 RPL7P37-201ENST00000425095 738 ntBASIC2.52□□□□□ -2.01
SCN2BO60939 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
SCN2BO60939 AC092573.2-201ENST00000434546 243 ntBASIC2.52□□□□□ -2.01
SCN2BO60939 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms