Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 AC008250.2-201ENST00000615261 205 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 AC015967.1-201ENST00000619893 476 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF3O43395 AL392088.2-201ENST00000637607 285 ntBASIC4.56□□□□□ -1.68
PRPF3O43395 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF3O43395 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.56□□□□□ -1.68
PRPF3O43395 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF3O43395 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.56□□□□□ -1.68
PRPF3O43395 AC005832.2-201ENST00000538921 1430 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF3O43395 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PRPF3O43395 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF3O43395 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF3O43395 RNU5A-8P-201ENST00000364102 114 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 SNORA75-201ENST00000384158 137 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 RNU6-432P-201ENST00000384196 109 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 RNU6-882P-201ENST00000391025 103 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 PPIAP31-201ENST00000405422 495 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 AC078974.1-201ENST00000411597 223 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 MTCO3P41-201ENST00000414801 328 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 SPA17P1-201ENST00000416656 452 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF3O43395 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF3O43395 RPL17P36-201ENST00000420302 549 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.55□□□□□ -1.68
PRPF3O43395 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.55□□□□□ -1.68
PRPF3O43395 AC073614.1-201ENST00000438690 650 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 MTND6P13-201ENST00000443510 523 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 RPL17P49-201ENST00000443728 411 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 RAC1P7-201ENST00000445367 377 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF3O43395 AC010285.1-201ENST00000470580 392 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 AP000926.1-201ENST00000479573 241 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.55□□□□□ -1.68
PRPF3O43395 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF3O43395 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.55□□□□□ -1.68
PRPF3O43395 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF3O43395 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.55□□□□□ -1.68
PRPF3O43395 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF3O43395 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF3O43395 RN7SKP298-201ENST00000515950 94 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 Y_RNA.672-201ENST00000516289 104 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 RN7SKP21-201ENST00000516503 220 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.55□□□□□ -1.68
PRPF3O43395 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF3O43395 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF3O43395 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF3O43395 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF3O43395 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.55□□□□□ -1.68
PRPF3O43395 AGGF1P4-201ENST00000568249 801 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 AC087683.1-201ENST00000591187 441 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 AP001429.1-201ENST00000602568 530 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 AC072046.2-201ENST00000618366 268 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.55□□□□□ -1.68
PRPF3O43395 PISRT1-201ENST00000626175 531 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 USP8P1-201ENST00000494673 3183 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
PRPF3O43395 AC016588.2-201ENST00000632484 3021 ntBASIC4.55□□□□□ -1.68
PRPF3O43395 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF3O43395 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
PRPF3O43395 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF3O43395 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRPF3O43395 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PRPF3O43395 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PRPF3O43395 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF3O43395 Y_RNA.359-201ENST00000365498 102 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRPF3O43395 RNU6-213P-201ENST00000384051 104 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 DEFB108C-201ENST00000400154 252 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF3O43395 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF3O43395 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF3O43395 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF3O43395 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.54□□□□□ -1.68
PRPF3O43395 NPM1P49-201ENST00000448027 714 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF3O43395 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF3O43395 MTND1P12-201ENST00000455231 147 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF3O43395 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF3O43395 AC096751.1-202ENST00000502691 1067 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 VN1R104P-201ENST00000505115 1009 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PRPF3O43395 KLHL2P1-201ENST00000508691 521 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 CDC42P4-201ENST00000510507 563 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 MIR2116-201ENST00000517221 80 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF3O43395 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF3O43395 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF3O43395 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF3O43395 AL157394.1-201ENST00000562983 1224 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF3O43395 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.54□□□□□ -1.68
PRPF3O43395 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.54□□□□□ -1.68
PRPF3O43395 AC137800.2-201ENST00000574375 120 ntBASIC4.54□□□□□ -1.68
PRPF3O43395 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PRPF3O43395 AC068790.2-201ENST00000602601 557 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms