Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNU6-877P-201ENST00000383868 107 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 Y_RNA.460-201ENST00000384255 102 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 RNU6-1300P-201ENST00000391046 108 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN1O15353 Y_RNA.598-201ENST00000410480 95 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN1O15353 AL354751.2-201ENST00000415471 210 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 AC007390.1-201ENST00000415722 356 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXN1O15353 AC005534.2-201ENST00000431047 433 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXN1O15353 AP000936.3-201ENST00000438127 255 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXN1O15353 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXN1O15353 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXN1O15353 NIPA2P5-201ENST00000452282 464 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 SNRPFP4-201ENST00000456366 242 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 APOOP2-201ENST00000461561 539 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 AC108078.3-201ENST00000502633 489 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 AC021678.1-201ENST00000505195 936 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 AC017037.1-201ENST00000508460 471 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.68□□□□□ -1.66
FOXN1O15353 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXN1O15353 RN7SKP18-201ENST00000516005 275 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 OR5AP1P-201ENST00000529730 940 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXN1O15353 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.68□□□□□ -1.66
FOXN1O15353 ARL2BPP2-201ENST00000550907 489 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXN1O15353 AC090312.1-201ENST00000580637 348 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXN1O15353 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXN1O15353 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN1O15353 AP001506.1-201ENST00000615444 211 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 MIR3662-201ENST00000637030 95 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 MIR1321-201ENST00000637766 79 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
FOXN1O15353 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN1O15353 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN1O15353 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXN1O15353 AC000123.3-201ENST00000624029 4975 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 DCAF13P1-201ENST00000495256 1330 ntBASIC4.68□□□□□ -1.66
FOXN1O15353 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXN1O15353 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN1O15353 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
FOXN1O15353 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXN1O15353 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
FOXN1O15353 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN1O15353 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN1O15353 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN1O15353 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN1O15353 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
FOXN1O15353 Y_RNA.142-201ENST00000363491 102 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 RNU6-723P-201ENST00000383973 107 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 Y_RNA.409-201ENST00000383990 98 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 RNU6-185P-201ENST00000384421 107 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 MIR16-1-201ENST00000385271 89 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 MIR320B1-201ENST00000390209 79 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 RPL23AP29-201ENST00000397284 453 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 RPL23AP47-201ENST00000408017 460 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 RNU4-55P-201ENST00000410731 137 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 RNA5SP39-201ENST00000411245 120 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AL009174.1-201ENST00000426577 416 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXN1O15353 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXN1O15353 AC006011.1-201ENST00000442758 349 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AL035551.1-201ENST00000446931 348 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 RPS11P1-201ENST00000451072 473 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AC022364.2-201ENST00000457963 554 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 RPL5P30-201ENST00000465511 891 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AC025518.1-201ENST00000479856 347 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.67□□□□□ -1.66
FOXN1O15353 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN1O15353 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN1O15353 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.67□□□□□ -1.66
FOXN1O15353 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN1O15353 AC239860.2-201ENST00000525886 270 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN1O15353 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.67□□□□□ -1.66
FOXN1O15353 AP003072.1-201ENST00000531740 145 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AC136618.2-201ENST00000575091 400 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN1O15353 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.67□□□□□ -1.66
FOXN1O15353 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN1O15353 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.67□□□□□ -1.66
FOXN1O15353 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.67□□□□□ -1.66
FOXN1O15353 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN1O15353 AL050343.2-201ENST00000607338 280 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AC093838.1-201ENST00000613014 469 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AC074140.1-201ENST00000621617 208 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AC243312.2-201ENST00000623340 601 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AC145207.9-201ENST00000623802 325 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN1O15353 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
FOXN1O15353 AL035425.3-201ENST00000564206 4996 ntBASIC4.67□□□□□ -1.66
FOXN1O15353 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
FOXN1O15353 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN1O15353 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN1O15353 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms