Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
NPHP1O15259 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.37□□□□□ -1.71
NPHP1O15259 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.37□□□□□ -1.71
NPHP1O15259 IGKV2-26-201ENST00000518305 343 ntBASIC4.37□□□□□ -1.71
NPHP1O15259 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.37□□□□□ -1.71
NPHP1O15259 AC012443.1-201ENST00000605605 231 ntBASIC4.37□□□□□ -1.71
NPHP1O15259 VIS1.1-201ENST00000610517 203 ntBASIC4.37□□□□□ -1.71
NPHP1O15259 AL139418.1-201ENST00000613613 177 ntBASIC4.37□□□□□ -1.71
NPHP1O15259 AL110115.1-201ENST00000614396 364 ntBASIC4.37□□□□□ -1.71
NPHP1O15259 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.37□□□□□ -1.71
NPHP1O15259 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NPHP1O15259 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPHP1O15259 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
NPHP1O15259 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.37□□□□□ -1.71
NPHP1O15259 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.37□□□□□ -1.71
NPHP1O15259 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NPHP1O15259 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPHP1O15259 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NPHP1O15259 AC002546.1-201ENST00000588041 2504 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.36□□□□□ -1.71
NPHP1O15259 RNU1-18P-201ENST00000363062 164 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 RNU6-328P-201ENST00000390887 106 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 HMGN2P8-201ENST00000391458 268 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 RSL24D1P4-201ENST00000400938 484 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 Z98941.1-201ENST00000407764 100 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.36□□□□□ -1.71
NPHP1O15259 RPS15AP38-201ENST00000413110 372 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 XKRYP1-201ENST00000423438 492 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 XKRYP2-201ENST00000432915 492 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.36□□□□□ -1.71
NPHP1O15259 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.36□□□□□ -1.71
NPHP1O15259 RAC1P7-201ENST00000445367 377 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.36□□□□□ -1.71
NPHP1O15259 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.36□□□□□ -1.71
NPHP1O15259 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.36□□□□□ -1.71
NPHP1O15259 RNU6-714P-201ENST00000516963 103 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NPHP1O15259 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.36□□□□□ -1.71
NPHP1O15259 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.36□□□□□ -1.71
NPHP1O15259 MED28P6-201ENST00000558776 231 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 AC009097.3-201ENST00000563557 1018 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 AL354943.1-201ENST00000572103 781 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 AL391001.1-201ENST00000602747 715 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 AC006557.5-201ENST00000603126 811 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 AL162713.1-201ENST00000604480 262 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 TUSC7.1-201ENST00000610969 165 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 AL590099.1-201ENST00000615276 138 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.36□□□□□ -1.71
NPHP1O15259 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPHP1O15259 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NPHP1O15259 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPHP1O15259 TNPO1P3-201ENST00000436471 2662 ntBASIC4.36□□□□□ -1.71
NPHP1O15259 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPHP1O15259 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPHP1O15259 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPHP1O15259 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPHP1O15259 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPHP1O15259 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPHP1O15259 AL161781.1-201ENST00000354277 403 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 RNA5SP374-201ENST00000362939 125 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 RNU6-931P-201ENST00000363850 107 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 RNU6-289P-201ENST00000364093 107 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 RNU6-173P-201ENST00000364215 104 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 RNU6-777P-201ENST00000364265 104 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 MTHFD2P2-201ENST00000407725 247 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 HIGD1AP15-201ENST00000416198 280 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.35□□□□□ -1.71
NPHP1O15259 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.35□□□□□ -1.71
NPHP1O15259 AC078785.3-201ENST00000476607 425 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.35□□□□□ -1.71
NPHP1O15259 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.35□□□□□ -1.71
NPHP1O15259 HMGB1P36-201ENST00000487709 576 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 AC004069.2-201ENST00000505438 1114 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 AC024589.1-201ENST00000512207 263 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.35□□□□□ -1.71
NPHP1O15259 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.35□□□□□ -1.71
NPHP1O15259 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPHP1O15259 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.35□□□□□ -1.71
NPHP1O15259 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.35□□□□□ -1.71
NPHP1O15259 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.35□□□□□ -1.71
NPHP1O15259 MIR4325-201ENST00000583049 90 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.35□□□□□ -1.71
NPHP1O15259 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPHP1O15259 AC022022.2-201ENST00000602989 360 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.35□□□□□ -1.71
NPHP1O15259 AC034229.4-201ENST00000607861 441 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 U6.98-201ENST00000637157 84 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 AL732372.2-225ENST00000642124 456 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.35□□□□□ -1.71
NPHP1O15259 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPHP1O15259 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 Z83843.1-201ENST00000604070 3685 ntBASIC4.35□□□□□ -1.71
NPHP1O15259 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPHP1O15259 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPHP1O15259 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.34□□□□□ -1.71
NPHP1O15259 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
NPHP1O15259 FRG1BP-201ENST00000278882 761 ntBASIC4.34□□□□□ -1.71
NPHP1O15259 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPHP1O15259 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPHP1O15259 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms