Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HMGN4O00479 AC104454.1-201ENST00000421341 1401 ntBASIC1.73□□□□□ -2.13
HMGN4O00479 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGN4O00479 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMGN4O00479 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
HMGN4O00479 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMGN4O00479 RNU6-50P-201ENST00000362356 103 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 RNU6-799P-201ENST00000363567 107 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 AL079342.1-201ENST00000401460 267 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 DNAJC19P6-201ENST00000401853 280 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 AL513331.1-201ENST00000411908 397 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.72□□□□□ -2.13
HMGN4O00479 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.72□□□□□ -2.13
HMGN4O00479 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGN4O00479 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.72□□□□□ -2.13
HMGN4O00479 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.72□□□□□ -2.13
HMGN4O00479 FABP5P13-201ENST00000452144 328 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.72□□□□□ -2.13
HMGN4O00479 AC135721.1-201ENST00000497954 479 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 MTCO2P9-201ENST00000503214 694 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 AC010625.1-201ENST00000511296 403 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGN4O00479 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.72□□□□□ -2.13
HMGN4O00479 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGN4O00479 AC109635.4-202ENST00000531666 412 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 OSBPL9P3-201ENST00000534523 595 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 AC091544.4-201ENST00000555268 342 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.72□□□□□ -2.13
HMGN4O00479 AC135628.1-201ENST00000568867 534 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.72□□□□□ -2.13
HMGN4O00479 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
HMGN4O00479 AL356280.1-201ENST00000603614 379 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 AL590282.1-201ENST00000610379 1136 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 AC104307.1-201ENST00000616142 196 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 AC243756.2-201ENST00000618406 463 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 uc_338.20-201ENST00000621563 178 ntBASIC1.72□□□□□ -2.13
HMGN4O00479 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMGN4O00479 Y_RNA.500-201ENST00000384466 111 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 RSL24D1P4-201ENST00000400938 484 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AL139413.1-201ENST00000421309 217 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGN4O00479 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 SNRPEP4-201ENST00000435815 279 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGN4O00479 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGN4O00479 HSFY3P-201ENST00000444242 1191 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 RPS26P56-201ENST00000444468 240 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGN4O00479 AC096571.1-202ENST00000506634 735 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AC010486.1-201ENST00000511793 424 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 RN7SKP277-201ENST00000516895 283 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMGN4O00479 CIR1P1-201ENST00000524055 1133 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AC087373.1-201ENST00000524920 491 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.71□□□□□ -2.14
HMGN4O00479 AC121758.2-201ENST00000553271 193 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMGN4O00479 ANP32BP3-201ENST00000559213 706 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 MIR4648-201ENST00000580107 72 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AC020895.1-201ENST00000595362 272 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AL392112.1-201ENST00000605115 829 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 KATNBL1P1-201ENST00000605192 748 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 BNIP3P19-201ENST00000605397 577 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AC008962.1-201ENST00000605729 304 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGN4O00479 AC024560.3-201ENST00000608482 349 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGN4O00479 VN1R74P-201ENST00000613259 503 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 AC007275.1-201ENST00000621243 671 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGN4O00479 AC090740.1-201ENST00000623193 2262 ntBASIC1.71□□□□□ -2.14
HMGN4O00479 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMGN4O00479 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMGN4O00479 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HMGN4O00479 MTND5P29-201ENST00000458676 1807 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 AL139276.1-201ENST00000311910 1001 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 RNU6-1180P-201ENST00000364935 107 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 SET-203ENST00000372688 801 ntTSL 2 BASIC1.7□□□□□ -2.14
HMGN4O00479 RNU6-253P-201ENST00000384730 105 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGN4O00479 RPL17P50-201ENST00000396131 546 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 RNU2-25P-201ENST00000411041 191 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 AC008173.1-201ENST00000418901 264 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMGN4O00479 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGN4O00479 HMGB1P22-201ENST00000505315 124 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGN4O00479 AC107393.1-201ENST00000512403 346 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 AC118465.1-201ENST00000513820 1271 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 RPPH1-2P-201ENST00000516688 293 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 RN7SKP40-201ENST00000517211 242 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGN4O00479 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGN4O00479 AC019227.1-201ENST00000526902 510 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 OR4R1P-201ENST00000529879 463 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 MIR4419B-201ENST00000577260 68 ntBASIC1.7□□□□□ -2.14
HMGN4O00479 MIR5194-201ENST00000582634 120 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms