Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC243773.3-201ENST00000613270 256 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 uc_338.25-201ENST00000613756 156 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 MTND2P41-201ENST00000637599 773 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AL390862.1-201ENST00000635467 1469 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 AC021755.1-201ENST00000559747 1447 ntBASIC3.27□□□□□ -1.89
NEDD8-MDP1E9PL57 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 OR5BR1P-201ENST00000524992 1330 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 OR1S2-201ENST00000302592 978 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 MIR30E-201ENST00000362104 92 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 RNU6-629P-201ENST00000384061 103 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 MIR634-201ENST00000385208 97 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 UBA52P6-201ENST00000399822 382 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 DHFRP6-201ENST00000401776 268 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 MTCO2P21-201ENST00000419780 677 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AL591719.1-201ENST00000444669 744 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 MRPS31P2-201ENST00000451581 518 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 RPS20P32-201ENST00000456044 356 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 HMGB1P25-201ENST00000468402 607 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 MTCYBP35-201ENST00000503630 1137 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 HSPA8P13-201ENST00000523715 472 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC009712.1-201ENST00000564938 316 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AL512347.1-201ENST00000566420 503 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC010928.3-201ENST00000587712 541 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AL355812.1-201ENST00000603215 216 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 RPL23AP92-201ENST00000603609 255 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AL592221.1-201ENST00000605266 382 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AL139418.1-201ENST00000613613 177 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC100793.4-201ENST00000613683 429 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC140725.3-201ENST00000616193 880 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC021755.4-201ENST00000616620 456 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC099506.2-201ENST00000623074 221 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 SNORA50A-202ENST00000629536 136 ntBASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.26□□□□□ -1.89
NEDD8-MDP1E9PL57 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 ZNF807-201ENST00000328088 1707 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 AL365361.1-201ENST00000566942 3481 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 AC005539.1-201ENST00000443768 1479 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 HMGB1P17-201ENST00000403495 628 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 MIR1284-201ENST00000408337 120 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 RPS15AP6-201ENST00000420703 385 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 PSMA6P3-201ENST00000428242 164 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 RPS25P9-201ENST00000435591 252 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 RPL23AP74-201ENST00000437246 471 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 Z99127.3-201ENST00000448158 395 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 RPS20P24-201ENST00000457473 361 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 S100A11P2-201ENST00000467589 312 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 AC090453.1-201ENST00000495560 436 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 XKRY-201ENST00000510392 1100 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 DEFB131D-201ENST00000526803 184 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 AC022080.3-201ENST00000544433 482 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 AL121603.1-201ENST00000553815 142 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 MAGOH2P-202ENST00000584384 429 ntBASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.25□□□□□ -1.89
NEDD8-MDP1E9PL57 VN1R78P-201ENST00000597393 564 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms