Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SMIM28A0A1B0GU29 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AC138915.3-201ENST00000562908 1389 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 SNORD116.1-201ENST00000365628 92 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 MIR512-1-201ENST00000384913 84 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 MTND4LP20-201ENST00000402379 270 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 RNA5SP80-201ENST00000410475 111 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AC106883.1-201ENST00000418805 562 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AC092648.1-201ENST00000425870 423 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 USP9YP22-201ENST00000438971 294 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AL034418.1-201ENST00000448675 860 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 PTGES3P5-201ENST00000455109 434 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AC011979.1-201ENST00000472300 483 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 SYPL1P1-201ENST00000473622 768 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AC010301.1-201ENST00000473936 355 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AL049830.2-201ENST00000480072 201 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 RNU6-415P-201ENST00000516252 97 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AP003385.6-201ENST00000531603 374 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 XIST_intron.1-201ENST00000619444 68 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 AC120349.2-201ENST00000625002 298 ntBASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SMIM28A0A1B0GU29 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
SMIM28A0A1B0GU29 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
SMIM28A0A1B0GU29 AC091152.2-201ENST00000591628 2569 ntBASIC3.03□□□□□ -1.93
SMIM28A0A1B0GU29 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
SMIM28A0A1B0GU29 AC092593.1-201ENST00000515413 1815 ntBASIC3.03□□□□□ -1.93
SMIM28A0A1B0GU29 AC093831.2-201ENST00000624393 3427 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 RNU1-112P-201ENST00000364401 164 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AL360182.1-201ENST00000397433 468 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AL138827.1-201ENST00000402666 306 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AL138880.1-201ENST00000405824 642 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 MTATP6P20-201ENST00000414147 562 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 MRPS36P1-201ENST00000421291 307 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AL139281.1-201ENST00000422120 335 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 USP9YP31-201ENST00000431405 881 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC236972.1-201ENST00000433225 199 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 VDAC1P3-201ENST00000434069 851 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 EEF1A1P39-201ENST00000440791 250 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AL662791.1-201ENST00000441992 928 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 ELOCP13-201ENST00000443934 329 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 VN1R10P-201ENST00000447106 875 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AL589880.1-201ENST00000448271 287 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 ZNF886P-201ENST00000450781 723 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC108938.1-201ENST00000451204 136 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 PNPLA4P1-201ENST00000458328 305 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC005410.1-202ENST00000460347 485 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC092757.1-201ENST00000467293 467 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 RPL23AP55-201ENST00000498163 452 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC117522.3-201ENST00000507974 584 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 RN7SKP244-201ENST00000516513 307 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 MIR4319-201ENST00000577285 85 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC006023.1-201ENST00000603944 259 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC027449.1-201ENST00000608890 407 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC090115.4-201ENST00000609970 188 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC107075.1-201ENST00000613695 314 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AL355493.4-201ENST00000618530 292 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC092650.2-201ENST00000619984 902 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC040168.1-201ENST00000623594 991 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC090772.4-201ENST00000623599 362 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 MTCO1P23-201ENST00000415223 1526 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SMIM28A0A1B0GU29 AC009487.2-201ENST00000420969 6821 ntBASIC3.01□□□□□ -1.93
SMIM28A0A1B0GU29 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms