Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 AC010374.2-201ENST00000512933 535 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 OR5AK1P-201ENST00000524837 922 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 AP003168.1-201ENST00000530091 307 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 AC007536.1-201ENST00000533382 349 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 AC015688.2-201ENST00000584523 262 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 AC078899.3-201ENST00000599065 212 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 MTATP6P2-201ENST00000603319 678 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 AC107308.1-201ENST00000615897 301 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 AC007318.2-201ENST00000620999 243 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 AP000676.4-201ENST00000624659 623 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 AC087821.2-201ENST00000637086 450 ntBASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TRBV11-1A0A0K0K1C0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
TRBV11-1A0A0K0K1C0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 SNRPEP2-201ENST00000397592 279 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 MIR887-201ENST00000401258 79 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 RNA5SP274-201ENST00000410484 108 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 BTF3P8-201ENST00000414577 526 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 ATG3P1-201ENST00000419507 911 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC019178.2-201ENST00000423595 505 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC092573.2-201ENST00000434546 243 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC024082.2-201ENST00000434771 238 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 NDUFB4P6-201ENST00000436819 366 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 YWHAZP7-201ENST00000436906 631 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 RPL23AP74-201ENST00000437246 471 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 RPL23AP58-201ENST00000440453 469 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 GAPDHP27-201ENST00000447427 1020 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 USP9YP34-201ENST00000453983 808 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 RPL31P60-201ENST00000478450 367 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AP000867.2-201ENST00000532468 320 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AL157394.1-201ENST00000562983 1224 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC011260.1-201ENST00000578420 472 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC011471.1-201ENST00000585766 187 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 VN1R87P-201ENST00000596706 487 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC079089.3-201ENST00000603094 673 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC093732.2-201ENST00000607950 274 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AL365361.1-201ENST00000566942 3481 ntBASIC2.77□□□□□ -1.97
TRBV11-1A0A0K0K1C0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 DEFB108F-201ENST00000344638 222 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 U8.9-201ENST00000365667 134 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 RPL7P27-201ENST00000403775 720 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC245054.2-201ENST00000415639 319 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 BEND7P1-201ENST00000422058 457 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 DPRXP1-201ENST00000426312 460 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 SAR1AP4-201ENST00000429225 591 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 SEPT7P5-201ENST00000434048 306 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC244505.3-201ENST00000454598 187 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 RPS3AP14-201ENST00000483907 780 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AL359273.1-201ENST00000510918 627 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 SCGB1D5P-201ENST00000515134 247 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 DEFB108D-201ENST00000527787 222 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AL136520.1-202ENST00000555494 763 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC106782.4-201ENST00000568264 210 ntBASIC2.76□□□□□ -1.97
TRBV11-1A0A0K0K1C0 AC010653.1-201ENST00000571108 881 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms