Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL035413.2-201ENST00000604801 525 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC009994.1-201ENST00000606889 253 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AC233309.1-201ENST00000619522 751 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 AL645937.1-201ENST00000641739 1652 ntBASIC4.77□□□□□ -1.65
CCDC163A0A0D9SF12 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC010300.1-201ENST00000600671 5134 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 TLK1P1-201ENST00000456760 2440 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 MUC2-202ENST00000613187 4845 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AL591848.1-201ENST00000413092 322 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 RAD17P1-201ENST00000418130 2042 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC018630.2-202ENST00000422992 927 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 EIF1P3-201ENST00000423841 334 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AL513185.2-201ENST00000425543 193 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 BX276092.6-201ENST00000430476 250 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 RPS17P8-201ENST00000434525 335 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 MTND4P25-201ENST00000441039 533 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 RPL23AP43-201ENST00000446445 471 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 FABP5P13-201ENST00000452144 328 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 BX276092.8-201ENST00000455722 250 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 RPL23AP24-201ENST00000458203 385 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 RPS27AP1-201ENST00000475545 471 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 RN7SL432P-201ENST00000484057 298 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC041039.1-201ENST00000485656 536 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 KLHL2P1-201ENST00000508691 521 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC091868.1-201ENST00000508746 304 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC004062.1-201ENST00000509926 645 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 SNORD27.1-201ENST00000516319 72 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 RNU2-58P-201ENST00000516403 183 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 SNORA31.20-201ENST00000517111 133 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AP000827.1-201ENST00000527814 258 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC007424.1-203ENST00000554613 687 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 OR4H12P-201ENST00000556269 907 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AL157700.1-201ENST00000561973 1432 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC006270.2-201ENST00000578523 652 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC022884.2-201ENST00000578535 580 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC012443.1-201ENST00000605605 231 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC023043.4-201ENST00000612081 449 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC025253.1-201ENST00000613623 543 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC130324.3-201ENST00000614165 542 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AC079684.1-201ENST00000621405 437 ntBASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC163A0A0D9SF12 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 AL354685.2-201ENST00000448218 1447 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 RNA5SP189-201ENST00000364920 115 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 SNORA71.2-201ENST00000364941 134 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 RNU6-1029P-201ENST00000384109 107 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 SNORA70C-201ENST00000384538 135 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 AL354719.1-201ENST00000406535 843 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 RPL23AP48-201ENST00000406913 488 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 AL356387.2-201ENST00000422272 243 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 PPP1R11P2-201ENST00000423543 382 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 RPL34P6-201ENST00000432390 345 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 RPL21P112-201ENST00000434403 463 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 AC024082.2-201ENST00000434771 238 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 PMCHL2-203ENST00000457791 237 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 RPS27AP17-201ENST00000463344 455 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 RN7SL303P-201ENST00000469773 251 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 RPL23AP55-201ENST00000498163 452 ntBASIC4.75□□□□□ -1.65
CCDC163A0A0D9SF12 AC078918.1-201ENST00000498515 228 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms