Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC100870.1-201ENST00000522035 505 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 OR5BN1P-201ENST00000532955 829 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AC023824.3-201ENST00000569003 562 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AF131215.7-201ENST00000602443 707 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AL020997.3-201ENST00000602843 359 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AC106900.2-201ENST00000604994 317 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AC019159.1-201ENST00000605094 187 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AL137847.3-201ENST00000611521 109 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AC135507.2-201ENST00000612443 309 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 CUL1P1-201ENST00000509510 2425 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 AC011460.1-201ENST00000636268 1834 ntBASIC2.61□□□□□ -1.99
USH1CQ9Y6N9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 RNA5SP374-201ENST00000362939 125 ntBASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 SNORD56.5-201ENST00000364281 72 ntBASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 U8.8-201ENST00000365399 135 ntBASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 ANAPC10P1-201ENST00000395991 556 ntBASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 BX682237.1-201ENST00000415016 335 ntBASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 Z96811.1-201ENST00000445880 108 ntBASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 AL671855.1-201ENST00000446875 1203 ntBASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 RPS20P24-201ENST00000457473 361 ntBASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 MTND3P24-201ENST00000506306 329 ntBASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 SEM1P1-201ENST00000506694 209 ntBASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USH1CQ9Y6N9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 FRG1BP-201ENST00000278882 761 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 NACA3P-201ENST00000359690 648 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 RPS4XP3-201ENST00000398541 413 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 AC133134.1-201ENST00000466800 359 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 SNORA48.9-201ENST00000516419 162 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 SNORA31.11-201ENST00000516528 139 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 OR10V3P-201ENST00000525712 725 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 OR4P1P-201ENST00000530808 1136 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 AP000889.1-201ENST00000530968 660 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 FAM60BP-201ENST00000578364 658 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 AC012669.1-201ENST00000603209 283 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 NUTF2P8-201ENST00000604593 363 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 AC106028.5-201ENST00000610332 395 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 VN1R7P-201ENST00000619242 903 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 BX649567.1-201ENST00000642071 1134 ntBASIC2.59□□□□□ -1.99
USH1CQ9Y6N9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
USH1CQ9Y6N9 AL049780.3-201ENST00000624612 1583 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
USH1CQ9Y6N9 AL672167.1-206ENST00000356293 943 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 Y_RNA.111-201ENST00000363248 100 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 SNORD82-201ENST00000365530 70 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 RNU1-138P-201ENST00000384093 164 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 MIR144-201ENST00000384886 86 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 AL356057.2-201ENST00000403318 432 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 AL138885.1-201ENST00000405921 675 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 AL023807.1-201ENST00000407932 359 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 RPLP0P7-201ENST00000416050 667 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 AC099677.1-201ENST00000420575 175 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.58□□□□□ -2
USH1CQ9Y6N9 RPL7P44-201ENST00000424827 742 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.58□□□□□ -2
USH1CQ9Y6N9 AL590664.1-201ENST00000448065 339 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 MTND2P19-201ENST00000449129 1012 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH1CQ9Y6N9 RPS4XP6-201ENST00000477670 797 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 VPS26AP1-201ENST00000483197 979 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.58□□□□□ -2
USH1CQ9Y6N9 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 AC011352.3-201ENST00000505162 593 ntBASIC2.58□□□□□ -2
USH1CQ9Y6N9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.58□□□□□ -2
USH1CQ9Y6N9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.58□□□□□ -2
USH1CQ9Y6N9 PRELID3BP4-201ENST00000515476 571 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms