Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 OR4R1P-201ENST00000529879 463 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AP001781.1-201ENST00000530977 207 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AC068831.4-201ENST00000556118 109 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 SNRPGP15-201ENST00000600149 222 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 XIAPP1-201ENST00000603162 600 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AC092954.2-201ENST00000609103 430 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 TUG1_2.1-201ENST00000614234 87 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AP005019.3-201ENST00000620418 560 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AC027290.2-201ENST00000623210 18662 ntBASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA3Q9Y5H0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 CR848007.1-201ENST00000442354 1699 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AL359922.3-201ENST00000624779 1670 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RAD17P1-201ENST00000418130 2042 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU1-20P-201ENST00000363314 162 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU6-173P-201ENST00000364215 104 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU6-1322P-201ENST00000364309 107 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RNA5SP509-201ENST00000364577 119 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RNA5SP235-201ENST00000365411 114 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU6-882P-201ENST00000391025 103 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 SDHCP2-201ENST00000398565 501 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 CALM2P3-201ENST00000400429 449 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RPL23AP48-201ENST00000406913 488 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 MIR1277-201ENST00000408536 78 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RN7SKP159-201ENST00000410657 292 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RNA5SP107-201ENST00000411358 122 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 UBE2FP1-201ENST00000416536 447 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AC007283.2-201ENST00000424739 197 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AL139415.2-201ENST00000431968 163 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AC005094.1-201ENST00000440420 368 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AL162389.1-201ENST00000449233 177 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RPL31P58-201ENST00000469001 379 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 S100A11P1-201ENST00000477525 312 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AC025164.1-201ENST00000496249 478 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 VN1R104P-201ENST00000505115 1009 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RNU6-718P-201ENST00000516166 105 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 RN7SKP21-201ENST00000516503 220 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 Y_RNA.693-201ENST00000516641 110 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AC103710.2-201ENST00000609912 942 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 SNHG22-203ENST00000617833 660 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AL356321.1-201ENST00000621360 228 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AC139792.3-201ENST00000623525 224 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 U3.53-201ENST00000628922 216 ntBASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA3Q9Y5H0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 Y_RNA.453-201ENST00000384223 109 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AL590762.2-201ENST00000395798 571 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AL603766.1-201ENST00000407763 664 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 U3.35-201ENST00000408405 208 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 RPL7AP73-201ENST00000413490 353 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 RPL21P24-201ENST00000413752 448 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 MED13P1-201ENST00000428342 171 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC004975.1-201ENST00000428733 208 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 RPS4XP4-201ENST00000443195 763 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 MTCO3P38-201ENST00000468910 766 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC011276.1-201ENST00000469688 323 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 MTAPP1-201ENST00000489154 819 ntBASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA3Q9Y5H0 ARL4AP2-201ENST00000507378 601 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms