Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 ARPC3P2-201ENST00000457786 533 ntBASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 SNORD42A-201ENST00000459584 64 ntBASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 RNA5SP135-201ENST00000517019 125 ntBASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 OR6C73P-201ENST00000546432 358 ntBASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 GNRHR2P1-201ENST00000555315 631 ntBASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 MIR4433B-201ENST00000581329 102 ntBASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 AC005344.1-201ENST00000613391 459 ntBASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 C2orf27A-204ENST00000623058 969 ntBASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
COL17A1Q9UMD9 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 OR5BR1P-201ENST00000524992 1330 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AC004944.1-201ENST00000517807 3059 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 Y_RNA.409-201ENST00000383990 98 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AL031121.1-201ENST00000406553 254 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 MIR1303-201ENST00000408625 86 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 EIF1P3-201ENST00000423841 334 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AL513175.1-201ENST00000431492 780 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 COX6CP18-201ENST00000448769 222 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AL033528.1-201ENST00000453780 140 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AC239798.3-201ENST00000454459 408 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 snoU109.1-201ENST00000459339 135 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 RPL7P38-201ENST00000488396 739 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AC048346.1-201ENST00000510247 144 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 HSPA8P13-201ENST00000523715 472 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 HIF1AP1-201ENST00000553642 175 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AL117187.1-201ENST00000555482 181 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AL136363.1-201ENST00000605349 337 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AC107214.2-201ENST00000608204 634 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 AC009268.2-201ENST00000621925 457 ntBASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC6.15□□□□□ -1.43
COL17A1Q9UMD9 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 RNU6-1106P-201ENST00000390845 107 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 CISD1P1-201ENST00000393907 327 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 NPM1P38-201ENST00000403835 865 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 DPPA2P2-201ENST00000418220 897 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AL365400.1-201ENST00000431854 640 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 RPS26P2-201ENST00000440331 348 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 RPL37P3-201ENST00000456825 293 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 RN7SL601P-201ENST00000471221 293 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AC005726.1-201ENST00000494679 427 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 RNU6-1170P-201ENST00000515974 106 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AP003122.3-201ENST00000526316 255 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AC087276.1-201ENST00000529659 480 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 OR5B10P-201ENST00000532869 642 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 HMGB2P1-201ENST00000591146 634 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AL161729.4-201ENST00000604650 476 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AC108479.2-201ENST00000617314 601 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 MIR8057-201ENST00000620957 69 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AC006504.8-201ENST00000621046 635 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 AL442128.2-201ENST00000620246 1824 ntBASIC6.14□□□□□ -1.43
COL17A1Q9UMD9 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 MTND5P30-201ENST00000452896 1731 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 AL672167.1-203ENST00000641299 2975 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 RNU6-702P-201ENST00000364982 107 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 Y_RNA.315-201ENST00000365117 102 ntBASIC6.13□□□□□ -1.43
COL17A1Q9UMD9 SNRPEP2-201ENST00000397592 279 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms