Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 SNORA7.2-201ENST00000364446 145 ntBASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 RPL23AP48-201ENST00000406913 488 ntBASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 SUMO2P2-201ENST00000456482 255 ntBASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 AGGF1P5-201ENST00000567900 919 ntBASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 PRELID3BP8-201ENST00000604148 295 ntBASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 AC055876.5-201ENST00000605667 259 ntBASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 AC004825.2-201ENST00000616634 455 ntBASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 AC040168.1-201ENST00000623594 991 ntBASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 AC004925.1-201ENST00000624256 2706 ntBASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 AC244517.1-201ENST00000606030 2086 ntBASIC6.03□□□□□ -1.44
SHROOM4Q9ULL8 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 AL356473.1-201ENST00000406203 1408 ntBASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 HSPE1P28-201ENST00000443139 211 ntBASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 RPS15AP17-201ENST00000470598 390 ntBASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 UBL5P3-201ENST00000475112 231 ntBASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 AP004371.1-201ENST00000525240 214 ntBASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 MTCO2P15-201ENST00000532655 656 ntBASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 AC061975.8-201ENST00000587058 721 ntBASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 AP002907.1-201ENST00000606361 1430 ntBASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 uc_338.25-201ENST00000613756 156 ntBASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 AC091925.2-201ENST00000625059 256 ntBASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 AC010149.2-201ENST00000637608 315 ntBASIC6.02□□□□□ -1.44
SHROOM4Q9ULL8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 MIR30E-201ENST00000362104 92 ntBASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 RNU6-629P-201ENST00000384061 103 ntBASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 ELOCP9-201ENST00000418624 239 ntBASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 AL139421.1-201ENST00000423010 169 ntBASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 AL109933.2-201ENST00000452651 260 ntBASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 RPL7P18-201ENST00000478965 734 ntBASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 RNU6-27P-201ENST00000516146 107 ntBASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 AC103783.1-201ENST00000520506 373 ntBASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 OR5D17P-201ENST00000531492 978 ntBASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 AC010198.2-201ENST00000550612 259 ntBASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 AC004009.2-201ENST00000623016 728 ntBASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM4Q9ULL8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 MIR513B-201ENST00000385136 84 ntBASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 AC006960.1-201ENST00000419980 153 ntBASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 AC022861.1-201ENST00000522981 663 ntBASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 AC109635.4-202ENST00000531666 412 ntBASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 MTND1P24-201ENST00000552175 861 ntBASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 MIR4435-1-201ENST00000582552 80 ntBASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 ELOCP29-201ENST00000588193 334 ntBASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 AC006270.3-201ENST00000605967 1036 ntBASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 uc_338.32-201ENST00000615087 172 ntBASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 Xist_exon1.1-201ENST00000618930 85 ntBASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHROOM4Q9ULL8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SHROOM4Q9ULL8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SHROOM4Q9ULL8 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6□□□□□ -1.45
SHROOM4Q9ULL8 SNORA51.2-201ENST00000364595 132 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 RNU4-28P-201ENST00000364739 141 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 SNORD67-201ENST00000390833 111 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 U3.29-201ENST00000391296 212 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 MTCO3P12-201ENST00000416718 547 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 AL138799.3-201ENST00000438968 350 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 NECAP1P2-201ENST00000455668 727 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6□□□□□ -1.45
SHROOM4Q9ULL8 AC128713.1-201ENST00000471495 306 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM4Q9ULL8 ST13P14-201ENST00000474095 734 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 MTCYBP41-201ENST00000528913 1123 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHROOM4Q9ULL8 AC091544.4-201ENST00000555268 342 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
SHROOM4Q9ULL8 VN1R79P-201ENST00000593540 513 ntBASIC6□□□□□ -1.45
SHROOM4Q9ULL8 AC080013.3-201ENST00000606839 578 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms