Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 AC007967.1-201ENST00000455422 1159 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 SNORD121B-201ENST00000458838 81 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 RPL31P60-201ENST00000478450 367 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC091167.1-201ENST00000492017 396 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC020893.1-201ENST00000502452 580 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 MRPS33P3-201ENST00000513456 322 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 SNORA31.1-201ENST00000515993 133 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 SNORA31.5-201ENST00000516190 133 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 RNU6-678P-201ENST00000516832 109 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC125611.2-201ENST00000551907 647 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC011260.1-201ENST00000578420 472 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 VN1R90P-201ENST00000595717 726 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 BNIP3P23-201ENST00000599655 511 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AL590392.1-201ENST00000604960 446 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 MIR6716-201ENST00000613413 80 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AL031667.3-201ENST00000620124 655 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC008443.7-201ENST00000622195 246 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AP000676.3-201ENST00000623299 569 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC005832.2-201ENST00000538921 1430 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC011460.1-201ENST00000636268 1834 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC005183.1-201ENST00000603687 1979 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC011477.1-204ENST00000623416 1325 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.15□□□□□ -1.9
UBQLN2Q9UHD9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
UBQLN2Q9UHD9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
UBQLN2Q9UHD9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AL391994.1-201ENST00000254724 282 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AL121657.1-201ENST00000327215 531 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 SNORA70.2-201ENST00000364506 135 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 Y_RNA.302-201ENST00000364997 102 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 RNU6-359P-201ENST00000365466 108 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 RNU6-76P-201ENST00000384060 104 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 RNU6-1207P-201ENST00000384343 107 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 MIR1290-201ENST00000408735 78 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 RN7SKP182-201ENST00000410772 298 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 MRPL50P2-201ENST00000416821 482 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 BX119904.4-201ENST00000424402 301 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 MTND1P20-201ENST00000430341 950 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 OR4K11P-201ENST00000431829 904 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 RPS6P15-201ENST00000431996 751 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 RPS3AP46-201ENST00000448352 682 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AL133217.1-201ENST00000450980 425 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 RPL30P9-201ENST00000465586 330 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 HMGB1P36-201ENST00000487709 576 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 RN7SL691P-201ENST00000494487 301 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AC010486.2-201ENST00000505572 483 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 MTCO1P35-201ENST00000515270 228 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AC018714.1-201ENST00000605028 208 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AC024560.3-201ENST00000608482 349 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AC103710.4-201ENST00000609301 899 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 AL731566.2-201ENST00000618971 317 ntBASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
UBQLN2Q9UHD9 MTND4P16-201ENST00000466108 1367 ntBASIC3.14□□□□□ -1.91
UBQLN2Q9UHD9 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.14□□□□□ -1.91
UBQLN2Q9UHD9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN2Q9UHD9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN2Q9UHD9 RNU5A-1-201ENST00000362698 116 ntBASIC3.14□□□□□ -1.91
UBQLN2Q9UHD9 RNA5SP383-201ENST00000362934 120 ntBASIC3.14□□□□□ -1.91
UBQLN2Q9UHD9 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBQLN2Q9UHD9 AL356421.1-201ENST00000403255 413 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms