Protein–RNA interactions for Protein: Q9NYV4

CDK12, Cyclin-dependent kinase 12, humanhuman

Predicted RBP Predictions only

Length 1,490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12Q9NYV4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDK12Q9NYV4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CDK12Q9NYV4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.82□□□□□ -1.96
CDK12Q9NYV4 RPL23AP58-201ENST00000440453 469 ntBASIC2.82□□□□□ -1.96
CDK12Q9NYV4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.82□□□□□ -1.96
CDK12Q9NYV4 AC009961.3-201ENST00000449832 765 ntBASIC2.82□□□□□ -1.96
CDK12Q9NYV4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.82□□□□□ -1.96
CDK12Q9NYV4 RPAP2P1-201ENST00000603626 1168 ntBASIC2.82□□□□□ -1.96
CDK12Q9NYV4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.82□□□□□ -1.96
CDK12Q9NYV4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.82□□□□□ -1.96
CDK12Q9NYV4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CDK12Q9NYV4 ZNF271P-202ENST00000465539 1970 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CDK12Q9NYV4 RNU2-68P-201ENST00000410878 191 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AL096701.2-201ENST00000416920 238 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AC005517.2-201ENST00000424673 553 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AC104332.2-201ENST00000429959 156 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 SDR42E1P3-201ENST00000438345 502 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 RPL34P26-201ENST00000445636 354 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AL137159.1-201ENST00000452808 512 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 IGLV3-17-201ENST00000519099 244 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AP000889.2-201ENST00000532684 490 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AC073387.2-201ENST00000604797 784 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 BX248123.2-201ENST00000606318 124 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AL589994.2-201ENST00000621124 579 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AF127577.6-201ENST00000623352 2191 ntBASIC2.81□□□□□ -1.96
CDK12Q9NYV4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
CDK12Q9NYV4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CDK12Q9NYV4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDK12Q9NYV4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDK12Q9NYV4 RNU1-57P-201ENST00000384491 166 ntBASIC2.8□□□□□ -1.96
CDK12Q9NYV4 SNORA67.5-201ENST00000391036 107 ntBASIC2.8□□□□□ -1.96
CDK12Q9NYV4 AF274854.1-201ENST00000413236 615 ntBASIC2.8□□□□□ -1.96
CDK12Q9NYV4 AC013268.2-201ENST00000420753 337 ntBASIC2.8□□□□□ -1.96
CDK12Q9NYV4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.8□□□□□ -1.96
CDK12Q9NYV4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.8□□□□□ -1.96
CDK12Q9NYV4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.8□□□□□ -1.96
CDK12Q9NYV4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.8□□□□□ -1.96
CDK12Q9NYV4 AC016877.3-201ENST00000606778 504 ntBASIC2.8□□□□□ -1.96
CDK12Q9NYV4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CDK12Q9NYV4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.8□□□□□ -1.96
CDK12Q9NYV4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CDK12Q9NYV4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.79□□□□□ -1.96
CDK12Q9NYV4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDK12Q9NYV4 SNORA51.11-201ENST00000384442 131 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AL021407.1-201ENST00000404531 386 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AC005005.2-201ENST00000420779 380 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 ATP5F1P1-201ENST00000433775 569 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 UBE2V1P5-201ENST00000440070 405 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 RSL24D1P2-201ENST00000445584 366 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AC006483.1-201ENST00000487308 313 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AC098799.2-201ENST00000509466 868 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 RN7SKP5-201ENST00000517045 272 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.79□□□□□ -1.96
CDK12Q9NYV4 MYL12BP1-201ENST00000569826 507 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 LRRC37A5P-203ENST00000580181 585 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 MIR5002-201ENST00000584713 97 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AC083899.3-201ENST00000603413 594 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AL360085.1-201ENST00000604713 532 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AC126118.1-201ENST00000607744 628 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AC005296.1-201ENST00000616145 209 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AC091953.2-201ENST00000623979 160 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CDK12Q9NYV4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
CDK12Q9NYV4 MTND4P35-201ENST00000604257 1375 ntBASIC2.79□□□□□ -1.96
CDK12Q9NYV4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.79□□□□□ -1.96
CDK12Q9NYV4 Y_RNA.191-201ENST00000363972 113 ntBASIC2.78□□□□□ -1.96
CDK12Q9NYV4 RNA5SP181-201ENST00000410246 98 ntBASIC2.78□□□□□ -1.96
CDK12Q9NYV4 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.78□□□□□ -1.96
CDK12Q9NYV4 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.78□□□□□ -1.96
CDK12Q9NYV4 AL445669.2-201ENST00000454425 421 ntBASIC2.78□□□□□ -1.96
CDK12Q9NYV4 AC090071.1-201ENST00000507713 644 ntBASIC2.78□□□□□ -1.96
CDK12Q9NYV4 TMEM248P1-201ENST00000510579 951 ntBASIC2.78□□□□□ -1.96
CDK12Q9NYV4 AC117532.1-201ENST00000514638 323 ntBASIC2.78□□□□□ -1.96
CDK12Q9NYV4 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.78□□□□□ -1.96
CDK12Q9NYV4 MIR4255-201ENST00000579351 72 ntBASIC2.78□□□□□ -1.96
CDK12Q9NYV4 APOOP1-201ENST00000604695 592 ntBASIC2.78□□□□□ -1.96
CDK12Q9NYV4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.78□□□□□ -1.96
CDK12Q9NYV4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDK12Q9NYV4 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CDK12Q9NYV4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.77□□□□□ -1.97
CDK12Q9NYV4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.77□□□□□ -1.97
CDK12Q9NYV4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.77□□□□□ -1.97
CDK12Q9NYV4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.77□□□□□ -1.97
CDK12Q9NYV4 LINC00216-201ENST00000623548 1126 ntBASIC2.77□□□□□ -1.97
CDK12Q9NYV4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDK12Q9NYV4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
CDK12Q9NYV4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDK12Q9NYV4 AC114546.3-201ENST00000623582 1734 ntBASIC2.77□□□□□ -1.97
CDK12Q9NYV4 RNU6-146P-201ENST00000384602 108 ntBASIC2.77□□□□□ -1.97
CDK12Q9NYV4 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.77□□□□□ -1.97
CDK12Q9NYV4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms