Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU6-500P-201ENST00000362349 107 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 U3.6-201ENST00000363622 211 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 RNA5SP88-201ENST00000365560 109 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 DYNLT3P1-201ENST00000378574 347 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 RNU5A-2P-201ENST00000384337 116 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AL024474.1-201ENST00000404655 591 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 RN7SKP263-201ENST00000411194 309 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 RPL7P8-201ENST00000411964 730 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC005297.2-201ENST00000450430 606 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 RNU7-136P-201ENST00000458819 69 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AL139099.1-201ENST00000497398 403 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 RNF138P1-201ENST00000502765 546 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 OR5BM1P-201ENST00000512021 366 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 RNU6-352P-201ENST00000516908 107 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 RN7SKP234-201ENST00000517173 224 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 IGKV2D-36-201ENST00000518643 226 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 GTF2IP22-201ENST00000554443 182 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC087499.8-201ENST00000578406 226 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 OR4G1P-201ENST00000588632 938 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC040904.1-201ENST00000590850 223 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 BNIP3P22-201ENST00000593399 556 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 VN1R92P-201ENST00000598511 928 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AF131215.7-201ENST00000602443 707 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AL590229.1-201ENST00000603497 542 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AL391497.1-201ENST00000608671 547 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC073114.1-201ENST00000612027 490 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC008443.7-201ENST00000622195 246 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 ZNF833P-201ENST00000424938 1494 ntBASIC3.27□□□□□ -1.89
NDE1Q9NXR1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.27□□□□□ -1.89
NDE1Q9NXR1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 MTCO1P23-201ENST00000415223 1526 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 RNU6-289P-201ENST00000364093 107 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 SNORD82-201ENST00000365530 70 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 RNU6-723P-201ENST00000383973 107 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 MT-TH-201ENST00000387441 69 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 SNORA26.8-201ENST00000391306 124 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 RPL31P1-201ENST00000398116 372 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 RPS15AP38-201ENST00000413110 372 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 Z99755.1-201ENST00000414048 380 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 OR8F1P-201ENST00000425243 930 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 RPL23AP69-201ENST00000431134 458 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 LARP1BP3-201ENST00000437229 869 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 THAP5P1-201ENST00000439089 262 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 KATNBL1P3-201ENST00000443475 909 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 KATNBL1P6-201ENST00000453433 915 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 USP9YP10-201ENST00000454868 628 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 RN7SL75P-201ENST00000461926 281 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 RPS7P7-201ENST00000463499 571 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 ST13P14-201ENST00000474095 734 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 RPS27AP1-201ENST00000475545 471 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 AL024509.2-201ENST00000493462 493 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 AC080014.1-201ENST00000496877 1201 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.26□□□□□ -1.89
NDE1Q9NXR1 AC060788.1-201ENST00000521318 469 ntBASIC3.26□□□□□ -1.89
NDE1Q9NXR1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms