Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RPL23AP33-201ENST00000442301 452 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 RPL23AP31-201ENST00000456160 467 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 RN7SL193P-201ENST00000491708 276 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 RNU2-69P-201ENST00000516061 100 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 Y_RNA.683-201ENST00000516508 93 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 RPS29P30-201ENST00000600975 111 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AL359547.2-201ENST00000615810 418 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AC073869.10-201ENST00000642016 354 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 EXOC5P1-201ENST00000510543 1969 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 AL359893.1-201ENST00000447628 1580 ntBASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CUEDC1Q9NWM3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
CUEDC1Q9NWM3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.71□□□□□ -1.49
CUEDC1Q9NWM3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CUEDC1Q9NWM3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.71□□□□□ -1.49
CUEDC1Q9NWM3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 OR52B3P-201ENST00000314715 928 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 SNORA74A-201ENST00000364089 198 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 SNORA23-201ENST00000365128 182 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 RNU6-339P-201ENST00000384310 107 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AL603910.2-201ENST00000407268 136 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 RPL35AP22-201ENST00000436855 335 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AL663074.2-201ENST00000440621 479 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AL590399.6-201ENST00000446396 307 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AL031274.1-201ENST00000450334 232 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 Y_RNA.667-201ENST00000516212 107 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 SCARNA18.1-201ENST00000516330 83 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 RNA5SP438-201ENST00000516561 112 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AC144568.1-201ENST00000520139 137 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 TXNP4-201ENST00000575018 310 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 MIR4776-2-201ENST00000580204 80 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 AL136313.1-201ENST00000624804 202 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 MIR6715B-201ENST00000637172 77 ntBASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CUEDC1Q9NWM3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 Y_RNA.237-201ENST00000364439 102 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 RPL23AP17-201ENST00000401064 499 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 AL391361.1-201ENST00000405580 489 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 RPL21P38-201ENST00000418090 167 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 RPS4XP5-201ENST00000419038 768 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 RPS3AP46-201ENST00000448352 682 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 AL445665.1-202ENST00000452436 324 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 AC009963.2-201ENST00000453431 138 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 AC084198.1-201ENST00000477747 402 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 RPS23P5-201ENST00000495419 428 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 AC114781.3-201ENST00000512083 142 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 RN7SKP147-201ENST00000517154 244 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 AC034114.1-201ENST00000520293 285 ntBASIC5.7□□□□□ -1.5
CUEDC1Q9NWM3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms