Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RNU6-699P-201ENST00000517081 110 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC087854.1-201ENST00000519706 414 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AP002404.1-201ENST00000532005 451 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 OR8R1P-201ENST00000543943 764 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 SETP7-201ENST00000552169 453 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 MYL12BP1-201ENST00000569826 507 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC020910.3-201ENST00000603701 874 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 AL359091.2-201ENST00000609303 556 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 AL031119.1-201ENST00000404707 1879 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC074029.4-201ENST00000624796 1859 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSU72Q9NP77 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSU72Q9NP77 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSU72Q9NP77 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 Y_RNA.455-201ENST00000384230 98 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 RNA5SP122-201ENST00000384457 108 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 SNORD70.1-201ENST00000391007 85 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 ENSAP1-201ENST00000392855 326 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 RNU6-1050P-201ENST00000410388 107 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 RN7SKP159-201ENST00000410657 292 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 RNU6-387P-201ENST00000411331 105 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 OR6E1P-201ENST00000414424 923 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 AC080125.1-201ENST00000414888 684 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 EIF4HP2-201ENST00000424380 563 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 AC008267.5-201ENST00000424928 265 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 AL360081.1-201ENST00000428299 555 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 HIGD1AP11-201ENST00000438361 280 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSU72Q9NP77 AC073476.1-201ENST00000452854 407 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 AC118758.1-202ENST00000454719 225 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 AC104472.2-201ENST00000469035 601 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 RN7SL612P-201ENST00000497704 295 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 Y_RNA.661-201ENST00000516003 99 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 RNU6-120P-201ENST00000516077 103 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSU72Q9NP77 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 RPL23AP84-201ENST00000571193 464 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 AC018462.2-201ENST00000605375 395 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 PRR13P7-201ENST00000605538 430 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 RPSAP73-201ENST00000614820 330 ntBASIC5.05□□□□□ -1.6
SSU72Q9NP77 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSU72Q9NP77 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.05□□□□□ -1.6
SSU72Q9NP77 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSU72Q9NP77 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSU72Q9NP77 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSU72Q9NP77 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSU72Q9NP77 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSU72Q9NP77 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSU72Q9NP77 Y_RNA.80-201ENST00000362996 102 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 RNU6-379P-201ENST00000363813 104 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 RNU6-946P-201ENST00000383878 107 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 Y_RNA.399-201ENST00000383955 105 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 RNU6-432P-201ENST00000384196 109 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 AL592291.1-201ENST00000403830 352 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 MIR1182-201ENST00000408363 97 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSU72Q9NP77 Y_RNA.594-201ENST00000410373 140 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 RPL30P3-201ENST00000424262 333 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 AC093151.1-201ENST00000427711 313 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 AL353597.2-202ENST00000434901 373 ntBASIC5.04□□□□□ -1.6
SSU72Q9NP77 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.04□□□□□ -1.6
SSU72Q9NP77 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 460.3 ms