Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 HSPE1P23-201ENST00000509838 286 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 RNA5SP216-201ENST00000516111 123 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 RNU6-714P-201ENST00000516963 103 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 ZNF321P-202ENST00000550843 495 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC090888.2-201ENST00000559765 1144 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC074050.1-201ENST00000563247 211 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 MIR4474-201ENST00000579189 78 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AL109653.1-201ENST00000603091 248 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AL022099.1-201ENST00000604551 712 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AL365503.1-201ENST00000605247 905 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC090186.1-201ENST00000605991 572 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC106028.5-201ENST00000610332 395 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.31□□□□□ -1.88
UBQLN3Q9H347 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.31□□□□□ -1.88
UBQLN3Q9H347 MFSD8-236ENST00000641509 4050 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC087359.1-201ENST00000508335 1740 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AL645937.1-201ENST00000641739 1652 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AL021368.2-201ENST00000606125 5352 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 RPL21P132-201ENST00000331267 462 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 SNORD9-201ENST00000362566 104 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 RNU6-97P-201ENST00000363387 104 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 RNU6-723P-201ENST00000383973 107 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AL136116.1-201ENST00000403591 381 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 SSXP9-201ENST00000417503 292 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC098592.1-201ENST00000419352 333 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 BEND7P1-201ENST00000422058 457 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 HSPD1P21-201ENST00000436541 245 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 LSM1P1-201ENST00000438629 273 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AL591503.2-201ENST00000442314 1005 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 PDSS1P2-201ENST00000449397 678 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 HMGB3P8-201ENST00000449709 577 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC093278.1-201ENST00000494700 600 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 PCBP2P3-201ENST00000509726 843 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 TXNP6-201ENST00000510190 310 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC017037.2-201ENST00000513850 890 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 MTND5P4-201ENST00000514978 288 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 RPL12P22-201ENST00000519073 490 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC023161.2-201ENST00000551218 780 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC009094.1-201ENST00000564443 426 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 COX6CP3-201ENST00000580869 223 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AL450489.1-201ENST00000612071 468 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AL353748.2-201ENST00000622148 471 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AL732618.1-201ENST00000623251 301 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC009039.2-201ENST00000624524 529 ntBASIC3.3□□□□□ -1.88
UBQLN3Q9H347 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
UBQLN3Q9H347 AC007823.1-201ENST00000569932 1566 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 FRG1BP-201ENST00000278882 761 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 RNU6-744P-201ENST00000365557 107 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 RNU6-1316P-201ENST00000384242 108 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 RNU6-1207P-201ENST00000384343 107 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 MIR135A2-201ENST00000384854 100 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 RPS3AP26-201ENST00000398259 784 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AL590084.2-201ENST00000401481 382 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AL356421.1-201ENST00000403255 413 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC109780.2-201ENST00000413467 845 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 RPL21P32-201ENST00000419877 477 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 BX119904.4-201ENST00000424402 301 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 MTCO1P39-201ENST00000426148 480 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms