Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS11Q9H270 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS11Q9H270 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VPS11Q9H270 AC097714.1-201ENST00000511272 1647 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS11Q9H270 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS11Q9H270 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS11Q9H270 Y_RNA.401-201ENST00000383965 117 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS11Q9H270 TXNP7-201ENST00000406296 293 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 RNA5SP56-201ENST00000410277 118 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 TPMTP2-201ENST00000414372 726 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS11Q9H270 CHEK2P3-201ENST00000416118 248 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 SPA17P1-201ENST00000416656 452 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS11Q9H270 AC112498.1-201ENST00000444401 332 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS11Q9H270 AC079168.2-201ENST00000453977 416 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 BTF3P5-201ENST00000457252 467 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 SNORD108-201ENST00000459332 71 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS11Q9H270 AC083798.1-201ENST00000472671 131 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 RN7SL727P-201ENST00000482164 296 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 RN7SL629P-201ENST00000489622 285 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AC108145.1-201ENST00000503770 153 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS11Q9H270 PTP4A1P4-201ENST00000512479 322 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 RNU1-6P-201ENST00000516290 144 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 Y_RNA.691-201ENST00000516611 103 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS11Q9H270 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS11Q9H270 AC018630.1-201ENST00000541376 925 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS11Q9H270 MIR3682-201ENST00000581338 84 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS11Q9H270 NRBF2P1-201ENST00000587407 859 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AC097468.3-201ENST00000607956 456 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AC103710.3-201ENST00000608157 948 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS11Q9H270 AC009237.17-201ENST00000618111 748 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AC090617.10-201ENST00000624308 134 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 KPNA2P2-201ENST00000419546 1489 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VPS11Q9H270 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS11Q9H270 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS11Q9H270 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS11Q9H270 AL356489.2-201ENST00000566968 3528 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VPS11Q9H270 LARP1BP1-201ENST00000506036 1359 ntBASIC4.65□□□□□ -1.66
VPS11Q9H270 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS11Q9H270 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.65□□□□□ -1.66
VPS11Q9H270 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VPS11Q9H270 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VPS11Q9H270 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS11Q9H270 RN7SKP95-201ENST00000362860 303 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 U8.4-201ENST00000363626 134 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 Y_RNA.259-201ENST00000364619 101 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 U3.15-201ENST00000365398 212 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS11Q9H270 VN1R8P-201ENST00000407739 893 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 AL160275.2-201ENST00000412010 394 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS11Q9H270 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS11Q9H270 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS11Q9H270 AC093162.1-201ENST00000419682 124 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS11Q9H270 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS11Q9H270 Z98949.2-201ENST00000440996 144 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 HSPE1P28-201ENST00000443139 211 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS11Q9H270 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS11Q9H270 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.65□□□□□ -1.67
VPS11Q9H270 MTCO2P29-201ENST00000465212 189 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 AC090142.1-201ENST00000465776 462 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS11Q9H270 RN7SL177P-201ENST00000476596 299 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 RPS4XP14-201ENST00000493072 781 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 AC025164.1-201ENST00000496249 478 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS11Q9H270 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS11Q9H270 RNA5SP497-201ENST00000516081 97 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 AC008694.2-201ENST00000517591 306 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS11Q9H270 AC087241.2-201ENST00000535801 324 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 AL109766.1-201ENST00000555080 552 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS11Q9H270 AC053481.3-201ENST00000577881 843 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 MIR544B-201ENST00000582372 78 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 MIR3149-201ENST00000584629 83 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.65□□□□□ -1.67
VPS11Q9H270 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS11Q9H270 AC087588.2-201ENST00000617667 426 ntBASIC4.65□□□□□ -1.67
VPS11Q9H270 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.65□□□□□ -1.67
VPS11Q9H270 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VPS11Q9H270 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.65□□□□□ -1.67
VPS11Q9H270 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VPS11Q9H270 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms