Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RNU2-29P-201ENST00000410423 189 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC009302.1-201ENST00000417147 390 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 ARL5AP1-201ENST00000418991 388 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 RPS29P15-201ENST00000458329 171 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 RNU7-66P-201ENST00000459469 62 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC092436.1-201ENST00000506450 503 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC128657.1-201ENST00000549459 145 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC011477.5-201ENST00000586571 259 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 APOOP1-201ENST00000604695 592 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC016925.2-201ENST00000605108 242 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC012618.3-205ENST00000637896 1496 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 THAP12P4-201ENST00000528321 2266 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC011978.2-201ENST00000569835 2054 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 SNORA62.1-201ENST00000364287 154 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 Y_RNA.414-201ENST00000384011 101 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 RNU6-1013P-201ENST00000384180 107 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 RNU6-463P-201ENST00000384340 107 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 SNORA70.10-201ENST00000384515 134 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 RNU4-14P-201ENST00000410858 122 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 EIF4A1P3-201ENST00000411521 244 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AL358176.3-201ENST00000420757 454 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 DDX39BP1-205ENST00000422507 192 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 RPL7L1P10-201ENST00000427790 463 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC004938.1-201ENST00000438468 308 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 RPL30P11-201ENST00000495304 339 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 RN7SL558P-201ENST00000497468 299 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC010350.1-201ENST00000504908 231 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC116562.3-201ENST00000506136 177 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AP001804.3-201ENST00000525146 880 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC068587.5-201ENST00000528506 175 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 RN7SL802P-201ENST00000577858 299 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC023813.4-201ENST00000607580 580 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC087385.3-201ENST00000620477 187 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 AC015908.5-201ENST00000623289 343 ntBASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
FOXP3Q9BZS1 MTCO1P12-201ENST00000414273 1543 ntBASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 AL445437.1-201ENST00000623157 3087 ntBASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 OR5P1P-201ENST00000299512 925 ntBASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 Y_RNA.459-201ENST00000384251 102 ntBASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 VDAC1P9-201ENST00000412766 841 ntBASIC5.02□□□□□ -1.61
FOXP3Q9BZS1 OR6C66P-201ENST00000414917 930 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms