Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CRYM-AS1-204ENST00000637983 556 ntBASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
UPF3BQ9BZI7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 XGY1-201ENST00000381172 446 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 AC073264.1-201ENST00000411508 416 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 RPS3AP9-201ENST00000417027 792 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 AC233981.1-201ENST00000423224 461 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 AC104472.2-201ENST00000469035 601 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 RPS4XP6-201ENST00000477670 797 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 AC108210.2-201ENST00000503681 201 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 Y_RNA.673-201ENST00000516306 88 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 RNU6-889P-201ENST00000517189 103 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 C1DP5-201ENST00000525775 383 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 AC139103.1-201ENST00000534696 1030 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 EIF1AXP2-201ENST00000555940 413 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 AC090695.1-201ENST00000561269 1222 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 AADACP1-206ENST00000561502 1193 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 MIR4504-201ENST00000577413 92 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 AC018618.2-201ENST00000604770 446 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 AC025034.2-201ENST00000623264 286 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 AC097372.4-201ENST00000625025 466 ntBASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.97□□□□□ -1.93
UPF3BQ9BZI7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 MTCO3P12-201ENST00000416718 547 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 MTCO2P17-201ENST00000424336 677 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 MTCO1P57-201ENST00000432182 261 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AC104057.1-201ENST00000515547 497 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 RNA5SP320-201ENST00000516263 124 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AC025881.1-201ENST00000518851 512 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AC008676.3-201ENST00000521237 435 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 IGKV3-31-201ENST00000523109 329 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 CIR1P1-201ENST00000524055 1133 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AL669831.4-202ENST00000590817 238 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AC060766.3-201ENST00000591442 263 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AC010620.2-201ENST00000600135 313 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AC018755.4-201ENST00000619715 454 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AC006249.1-201ENST00000621223 471 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 U6.107-201ENST00000637108 79 ntBASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.96□□□□□ -1.94
UPF3BQ9BZI7 AC090740.1-201ENST00000623193 2262 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 MAPK10-266ENST00000641066 6555 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 SNORA67.4-201ENST00000384688 142 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 SNORA3.2-201ENST00000408221 125 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 BX276092.3-201ENST00000424182 230 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 AL513321.1-201ENST00000441175 761 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 RPL23AP15-201ENST00000450202 459 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 RNA5SP148-201ENST00000516527 94 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 IGKV2D-36-201ENST00000518643 226 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 DPRXP5-201ENST00000604662 539 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 AP000676.4-201ENST00000624659 623 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 AC090897.3-201ENST00000636973 1157 ntBASIC2.95□□□□□ -1.94
UPF3BQ9BZI7 AC069528.2-201ENST00000624849 1991 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 AC091564.4-201ENST00000533934 2194 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 FRG1BP-201ENST00000278882 761 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 Y_RNA.238-201ENST00000364441 102 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 U8.8-201ENST00000365399 135 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 MT-TC-201ENST00000387405 66 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 CYCSP45-201ENST00000402289 315 ntBASIC2.94□□□□□ -1.94
UPF3BQ9BZI7 RNA5SP247-201ENST00000411181 105 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms