Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.97□□□□□ -1.93
SCAPERQ9BY12 AL445669.2-201ENST00000454425 421 ntBASIC2.97□□□□□ -1.93
SCAPERQ9BY12 RPL36AP21-201ENST00000490372 323 ntBASIC2.97□□□□□ -1.93
SCAPERQ9BY12 RNA5SP445-201ENST00000515889 115 ntBASIC2.97□□□□□ -1.93
SCAPERQ9BY12 PRELID2P1-201ENST00000552837 301 ntBASIC2.97□□□□□ -1.93
SCAPERQ9BY12 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.97□□□□□ -1.93
SCAPERQ9BY12 AL356280.1-201ENST00000603614 379 ntBASIC2.97□□□□□ -1.93
SCAPERQ9BY12 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCAPERQ9BY12 Y_RNA.269-201ENST00000364685 89 ntBASIC2.96□□□□□ -1.94
SCAPERQ9BY12 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.96□□□□□ -1.94
SCAPERQ9BY12 HSPE1P26-201ENST00000405341 275 ntBASIC2.96□□□□□ -1.94
SCAPERQ9BY12 AL450338.1-201ENST00000407987 512 ntBASIC2.96□□□□□ -1.94
SCAPERQ9BY12 RNU4-62P-201ENST00000410125 130 ntBASIC2.96□□□□□ -1.94
SCAPERQ9BY12 AL358453.1-201ENST00000422522 250 ntBASIC2.96□□□□□ -1.94
SCAPERQ9BY12 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.96□□□□□ -1.94
SCAPERQ9BY12 USP9YP8-201ENST00000441913 500 ntBASIC2.96□□□□□ -1.94
SCAPERQ9BY12 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.96□□□□□ -1.94
SCAPERQ9BY12 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.96□□□□□ -1.94
SCAPERQ9BY12 AC005840.1-201ENST00000498412 377 ntBASIC2.96□□□□□ -1.94
SCAPERQ9BY12 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.96□□□□□ -1.94
SCAPERQ9BY12 MIR5089-201ENST00000580047 84 ntBASIC2.96□□□□□ -1.94
SCAPERQ9BY12 XKRY2-202ENST00000623874 1581 ntBASIC2.96□□□□□ -1.94
SCAPERQ9BY12 XKRY-202ENST00000624960 1581 ntBASIC2.96□□□□□ -1.94
SCAPERQ9BY12 Y_RNA.355-201ENST00000365462 98 ntBASIC2.95□□□□□ -1.94
SCAPERQ9BY12 AL627390.1-201ENST00000396055 340 ntBASIC2.95□□□□□ -1.94
SCAPERQ9BY12 AC099336.2-201ENST00000422457 254 ntBASIC2.95□□□□□ -1.94
SCAPERQ9BY12 ATP5F1P1-201ENST00000433775 569 ntBASIC2.95□□□□□ -1.94
SCAPERQ9BY12 RPL23AP76-201ENST00000441860 458 ntBASIC2.95□□□□□ -1.94
SCAPERQ9BY12 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.95□□□□□ -1.94
SCAPERQ9BY12 AC108078.2-201ENST00000510750 236 ntBASIC2.95□□□□□ -1.94
SCAPERQ9BY12 AL159169.2-201ENST00000610061 1269 ntBASIC2.95□□□□□ -1.94
SCAPERQ9BY12 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.95□□□□□ -1.94
SCAPERQ9BY12 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SCAPERQ9BY12 RNY1P10-201ENST00000363268 113 ntBASIC2.94□□□□□ -1.94
SCAPERQ9BY12 MIR499A-201ENST00000384903 122 ntBASIC2.94□□□□□ -1.94
SCAPERQ9BY12 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SCAPERQ9BY12 AP1B1P2-201ENST00000416196 106 ntBASIC2.94□□□□□ -1.94
SCAPERQ9BY12 AC027124.2-201ENST00000428249 105 ntBASIC2.94□□□□□ -1.94
SCAPERQ9BY12 AC104564.1-201ENST00000493028 407 ntBASIC2.94□□□□□ -1.94
SCAPERQ9BY12 AC012170.1-201ENST00000495139 359 ntBASIC2.94□□□□□ -1.94
SCAPERQ9BY12 RN7SKP34-201ENST00000516142 244 ntBASIC2.94□□□□□ -1.94
SCAPERQ9BY12 HSPE1P20-201ENST00000538133 289 ntBASIC2.94□□□□□ -1.94
SCAPERQ9BY12 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.94□□□□□ -1.94
SCAPERQ9BY12 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SCAPERQ9BY12 AC010678.1-201ENST00000614118 713 ntBASIC2.94□□□□□ -1.94
SCAPERQ9BY12 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.94□□□□□ -1.94
SCAPERQ9BY12 RNU6-1263P-201ENST00000384601 106 ntBASIC2.93□□□□□ -1.94
SCAPERQ9BY12 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 AC011753.1-201ENST00000451001 220 ntBASIC2.93□□□□□ -1.94
SCAPERQ9BY12 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.93□□□□□ -1.94
SCAPERQ9BY12 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 FO624990.1-201ENST00000636373 85 ntBASIC2.93□□□□□ -1.94
SCAPERQ9BY12 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 RNU1-109P-201ENST00000383960 147 ntBASIC2.93□□□□□ -1.94
SCAPERQ9BY12 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 RPL5P19-201ENST00000404228 893 ntBASIC2.93□□□□□ -1.94
SCAPERQ9BY12 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 HMGB3P10-201ENST00000434734 572 ntBASIC2.93□□□□□ -1.94
SCAPERQ9BY12 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 MTAPP1-201ENST00000489154 819 ntBASIC2.93□□□□□ -1.94
SCAPERQ9BY12 AC090543.1-201ENST00000492168 485 ntBASIC2.93□□□□□ -1.94
SCAPERQ9BY12 RPS29P11-201ENST00000496507 171 ntBASIC2.93□□□□□ -1.94
SCAPERQ9BY12 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 AC084768.2-201ENST00000622736 221 ntBASIC2.93□□□□□ -1.94
SCAPERQ9BY12 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.93□□□□□ -1.94
SCAPERQ9BY12 CR382285.2-201ENST00000624662 1495 ntBASIC2.92□□□□□ -1.94
SCAPERQ9BY12 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SCAPERQ9BY12 MTND1P23-201ENST00000416931 372 ntBASIC2.92□□□□□ -1.94
SCAPERQ9BY12 TAF9P1-201ENST00000445421 515 ntBASIC2.92□□□□□ -1.94
SCAPERQ9BY12 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.92□□□□□ -1.94
SCAPERQ9BY12 TAF9P2-201ENST00000454958 515 ntBASIC2.92□□□□□ -1.94
SCAPERQ9BY12 AC012181.1-201ENST00000479895 423 ntBASIC2.92□□□□□ -1.94
SCAPERQ9BY12 AC011352.3-201ENST00000505162 593 ntBASIC2.92□□□□□ -1.94
SCAPERQ9BY12 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.92□□□□□ -1.94
SCAPERQ9BY12 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.92□□□□□ -1.94
SCAPERQ9BY12 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.92□□□□□ -1.94
SCAPERQ9BY12 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.92□□□□□ -1.94
SCAPERQ9BY12 AC010735.1-201ENST00000567305 1026 ntBASIC2.92□□□□□ -1.94
SCAPERQ9BY12 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.92□□□□□ -1.94
SCAPERQ9BY12 HMGN2P28-201ENST00000606102 262 ntBASIC2.92□□□□□ -1.94
SCAPERQ9BY12 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SCAPERQ9BY12 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SCAPERQ9BY12 MIR337-201ENST00000362281 93 ntBASIC2.91□□□□□ -1.94
SCAPERQ9BY12 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.91□□□□□ -1.94
SCAPERQ9BY12 AC007182.2-201ENST00000489251 402 ntBASIC2.91□□□□□ -1.94
SCAPERQ9BY12 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.91□□□□□ -1.94
SCAPERQ9BY12 AC034102.8-201ENST00000615146 484 ntBASIC2.91□□□□□ -1.94
SCAPERQ9BY12 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.9□□□□□ -1.94
SCAPERQ9BY12 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.9□□□□□ -1.95
SCAPERQ9BY12 RNU6-146P-201ENST00000384602 108 ntBASIC2.9□□□□□ -1.95
SCAPERQ9BY12 AL021407.1-201ENST00000404531 386 ntBASIC2.9□□□□□ -1.95
SCAPERQ9BY12 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.9□□□□□ -1.95
SCAPERQ9BY12 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
SCAPERQ9BY12 AC104435.1-201ENST00000483483 166 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms