Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.3□□□□□ -1.88
RPAP1Q9BWH6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 RNU6-600P-201ENST00000362524 99 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 RNU6-263P-201ENST00000363811 107 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 RNU6-921P-201ENST00000384361 107 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 SNORA67.4-201ENST00000384688 142 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 RNA5SP508-201ENST00000411327 119 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AC019070.1-201ENST00000415008 1024 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 TAF13P2-201ENST00000416876 286 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 snoU13.3-201ENST00000459441 104 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AC118282.2-201ENST00000508739 374 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 MTCO3P44-201ENST00000510977 541 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AC109471.1-201ENST00000511631 612 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 RNU1-41P-201ENST00000516161 162 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 RNU1-48P-201ENST00000516400 162 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 MIR3690-201ENST00000580266 75 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 ZNF861P-201ENST00000588126 639 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AC023043.3-201ENST00000593113 385 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AC008277.2-201ENST00000605196 797 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AC026790.2-201ENST00000606282 430 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 AC087241.4-201ENST00000612441 480 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 BX649567.1-201ENST00000642071 1134 ntBASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RPAP1Q9BWH6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AL353746.1-201ENST00000566293 6881 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 RNU6-207P-201ENST00000384137 107 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 Y_RNA.493-201ENST00000384422 102 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 RNU6-549P-201ENST00000384433 107 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 RSL24D1P4-201ENST00000400938 484 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AL139039.1-201ENST00000401900 692 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 RNA5SP56-201ENST00000410277 118 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 RNU4-78P-201ENST00000410940 126 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AC112220.1-201ENST00000434628 355 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AL513328.1-201ENST00000446460 224 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 TRBV12-1-201ENST00000479785 344 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AC010735.1-201ENST00000567305 1026 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 MTCO3P13-201ENST00000577757 781 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AC104763.2-201ENST00000604179 382 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AC025588.3-201ENST00000604182 274 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AL627309.6-201ENST00000606857 840 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AC084824.5-201ENST00000612009 413 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AC093875.1-201ENST00000623688 504 ntBASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RPAP1Q9BWH6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
RPAP1Q9BWH6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 TAB3P1-202ENST00000452645 1634 ntBASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 MIR196B-201ENST00000384852 84 ntBASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 AL356057.3-201ENST00000402607 340 ntBASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 MTCO2P31-201ENST00000402702 684 ntBASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 SFR1P2-201ENST00000421841 730 ntBASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 AC104073.1-201ENST00000451988 151 ntBASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 RPL23AP55-201ENST00000498163 452 ntBASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 SNORD39.3-201ENST00000584451 71 ntBASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 AC068880.4-201ENST00000623082 495 ntBASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.27□□□□□ -1.89
RPAP1Q9BWH6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 AC116096.1-201ENST00000566804 2314 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 RNVU1-3-201ENST00000364313 161 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 SNORA51.2-201ENST00000364595 132 ntBASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RPAP1Q9BWH6 RNU6-837P-201ENST00000391056 108 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms