Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AL035423.1-201ENST00000420331 213 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AL953862.1-201ENST00000423016 168 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 RPL23AP74-201ENST00000437246 471 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AL591503.2-201ENST00000442314 1005 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 COX6CP2-201ENST00000444980 225 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 XKRY-201ENST00000510392 1100 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AC026412.2-201ENST00000512270 1075 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 RNU6-678P-201ENST00000516832 109 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 OR8R1P-201ENST00000543943 764 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AP000811.1-201ENST00000603803 651 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 DUXAP11-201ENST00000603858 526 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AC080013.4-201ENST00000607624 649 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AL513477.2-201ENST00000607858 568 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AC131902.3-201ENST00000611767 581 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AL392048.1-201ENST00000613946 534 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AL607023.1-201ENST00000620045 248 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AP000676.3-201ENST00000623299 569 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AC231657.1-201ENST00000624313 397 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 CU459211.1-201ENST00000635667 749 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AC127502.3-201ENST00000636170 1206 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 AC026951.1-201ENST00000559530 2459 ntBASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CCDC28BQ9BUN5 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 PABPC1P7-201ENST00000413177 1513 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 ARF4P3-201ENST00000397387 509 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 EIF5P1-201ENST00000400019 1231 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 RPS15AP38-201ENST00000413110 372 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC245054.2-201ENST00000415639 319 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AL139281.1-201ENST00000422120 335 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 PSMA2P3-201ENST00000429685 675 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 GOT2P5-201ENST00000433995 546 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC093392.2-201ENST00000450682 337 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 RPL23AP35-201ENST00000451906 501 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 GSTA11P-201ENST00000452866 669 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC073387.1-201ENST00000453261 709 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC026410.2-201ENST00000460281 156 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC097493.1-201ENST00000463958 372 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 BZW1P2-201ENST00000473537 826 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 RPL30P6-201ENST00000475925 342 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 BET1P1-201ENST00000482276 359 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC104685.1-201ENST00000502445 371 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 MTCYBP17-201ENST00000503579 789 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC093534.1-201ENST00000504977 132 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 FCF1P8-201ENST00000510322 597 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 Y_RNA.688-201ENST00000516565 95 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 RN7SKP282-201ENST00000516824 299 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 RNU6-232P-201ENST00000517144 64 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 CYCSP2-201ENST00000558168 301 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AL109653.1-201ENST00000603091 248 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC013444.2-201ENST00000603317 787 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 RPL23AP92-201ENST00000603609 255 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AL596327.1-201ENST00000603629 213 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC018714.1-201ENST00000605028 208 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 RNU6-88P-201ENST00000606801 100 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AL391497.1-201ENST00000608671 547 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC072039.2-201ENST00000608883 439 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC006023.2-201ENST00000609916 167 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC004223.4-201ENST00000612426 332 ntBASIC3.19□□□□□ -1.9
CCDC28BQ9BUN5 AC122133.1-201ENST00000613964 233 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms