Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC006960.3-201ENST00000561845 705 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 AL353997.4-201ENST00000586196 166 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC131235.4-201ENST00000609288 620 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC090132.2-201ENST00000615881 347 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC006133.1-201ENST00000617106 264 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC039056.2-201ENST00000622261 511 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AL159972.1-201ENST00000625150 448 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 MIR4275-201ENST00000636486 87 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VMP1Q96GC9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VMP1Q96GC9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VMP1Q96GC9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VMP1Q96GC9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
VMP1Q96GC9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
VMP1Q96GC9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VMP1Q96GC9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VMP1Q96GC9 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VMP1Q96GC9 RNA5SP124-201ENST00000362739 110 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 RNA5SP139-201ENST00000364340 117 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 RNU6-1078P-201ENST00000364522 103 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 RNU6-621P-201ENST00000364752 109 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 MIR200C-201ENST00000384980 68 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 AC007066.1-201ENST00000392902 381 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 RPL23AP29-201ENST00000397284 453 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 RPL21P17-201ENST00000397467 475 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 MIR1289-1-201ENST00000408836 144 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 RNU6-55P-201ENST00000411092 107 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 RNU6-954P-201ENST00000411355 107 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.46□□□□□ -1.86
VMP1Q96GC9 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.46□□□□□ -1.86
VMP1Q96GC9 TAAR7P-201ENST00000436141 242 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 EXOSC3P1-201ENST00000448649 500 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.46□□□□□ -1.86
VMP1Q96GC9 AC092798.1-201ENST00000458542 409 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 RNU6-420P-201ENST00000458780 107 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 AC104563.1-201ENST00000476147 376 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 RPL21P129-201ENST00000491732 478 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.46□□□□□ -1.86
VMP1Q96GC9 WBP1LP4-201ENST00000505043 344 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 AC110768.1-201ENST00000509222 400 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 AL121766.1-201ENST00000547436 487 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.46□□□□□ -1.86
VMP1Q96GC9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.46□□□□□ -1.86
VMP1Q96GC9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 MIR3158-1-201ENST00000583596 81 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 AP001269.3-201ENST00000588718 329 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 RNU1-30P-201ENST00000606575 163 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 AL161629.2-201ENST00000615347 275 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 AC079684.1-201ENST00000621405 437 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.46□□□□□ -1.86
VMP1Q96GC9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VMP1Q96GC9 AC116618.1-201ENST00000634617 774 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VMP1Q96GC9 ZNF285B-201ENST00000561698 1767 ntBASIC3.46□□□□□ -1.86
VMP1Q96GC9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
VMP1Q96GC9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VMP1Q96GC9 AL359837.1-201ENST00000381357 287 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 Y_RNA.465-201ENST00000384293 102 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 RNU6-1207P-201ENST00000384343 107 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 MIR514A1-201ENST00000385133 98 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 SNORA48.7-201ENST00000391302 135 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 RAB9AP3-201ENST00000412737 573 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 RPS7P13-201ENST00000413955 498 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 AL035423.1-201ENST00000420331 213 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 AL953862.1-201ENST00000423016 168 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 RPL7L1P10-201ENST00000427790 463 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 AC091862.1-201ENST00000438016 1100 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 RPS3AP46-201ENST00000448352 682 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 AL031313.1-201ENST00000448435 256 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 RAB9AP1-201ENST00000449393 573 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 AC005410.1-202ENST00000460347 485 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 RPS3AP50-201ENST00000487064 803 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 ARL4AP2-201ENST00000507378 601 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.45□□□□□ -1.86
VMP1Q96GC9 RNU1-95P-201ENST00000516357 160 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 SNORA67.7-201ENST00000516664 135 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 RNU1-128P-201ENST00000516704 160 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.45□□□□□ -1.86
VMP1Q96GC9 AC007991.1-201ENST00000522680 631 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 OR5AP1P-201ENST00000529730 940 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.45□□□□□ -1.86
VMP1Q96GC9 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.45□□□□□ -1.86
VMP1Q96GC9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.45□□□□□ -1.86
VMP1Q96GC9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.45□□□□□ -1.86
VMP1Q96GC9 AC006270.3-201ENST00000605967 1036 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VMP1Q96GC9 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.45□□□□□ -1.86
VMP1Q96GC9 AC012442.3-202ENST00000636742 206 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 AP000553.6-201ENST00000641242 118 ntBASIC3.45□□□□□ -1.86
VMP1Q96GC9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms