Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AL138785.1-201ENST00000425821 331 ntBASIC1.88□□□□□ -2.11
TTC28Q96AY4 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC1.88□□□□□ -2.11
TTC28Q96AY4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.88□□□□□ -2.11
TTC28Q96AY4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.88□□□□□ -2.11
TTC28Q96AY4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
TTC28Q96AY4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TTC28Q96AY4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TTC28Q96AY4 MTND4P10-201ENST00000446199 1363 ntBASIC1.87□□□□□ -2.11
TTC28Q96AY4 OR4G1P-203ENST00000641984 1631 ntBASIC1.87□□□□□ -2.11
TTC28Q96AY4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
TTC28Q96AY4 MIR181B1-201ENST00000385240 110 ntBASIC1.87□□□□□ -2.11
TTC28Q96AY4 HMGB1P11-201ENST00000413899 637 ntBASIC1.87□□□□□ -2.11
TTC28Q96AY4 AC005005.2-201ENST00000420779 380 ntBASIC1.87□□□□□ -2.11
TTC28Q96AY4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.87□□□□□ -2.11
TTC28Q96AY4 SUMO2P4-201ENST00000504193 276 ntBASIC1.87□□□□□ -2.11
TTC28Q96AY4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.87□□□□□ -2.11
TTC28Q96AY4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.87□□□□□ -2.11
TTC28Q96AY4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TTC28Q96AY4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.87□□□□□ -2.11
TTC28Q96AY4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.87□□□□□ -2.11
TTC28Q96AY4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.87□□□□□ -2.11
TTC28Q96AY4 AC008264.2-201ENST00000610193 3731 ntBASIC1.87□□□□□ -2.11
TTC28Q96AY4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TTC28Q96AY4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.86□□□□□ -2.11
TTC28Q96AY4 RNU6-249P-201ENST00000363016 102 ntBASIC1.86□□□□□ -2.11
TTC28Q96AY4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.86□□□□□ -2.11
TTC28Q96AY4 AIMP1P1-201ENST00000418670 937 ntBASIC1.86□□□□□ -2.11
TTC28Q96AY4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC1.86□□□□□ -2.11
TTC28Q96AY4 SETP10-201ENST00000424368 814 ntBASIC1.86□□□□□ -2.11
TTC28Q96AY4 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.86□□□□□ -2.11
TTC28Q96AY4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
TTC28Q96AY4 AC034222.1-201ENST00000494052 532 ntBASIC1.86□□□□□ -2.11
TTC28Q96AY4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.86□□□□□ -2.11
TTC28Q96AY4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC1.86□□□□□ -2.11
TTC28Q96AY4 U7.8-201ENST00000619968 63 ntBASIC1.86□□□□□ -2.11
TTC28Q96AY4 AC074140.1-201ENST00000621617 208 ntBASIC1.86□□□□□ -2.11
TTC28Q96AY4 RNU2-20P-201ENST00000410425 191 ntBASIC1.86□□□□□ -2.11
TTC28Q96AY4 AC079776.3-201ENST00000450665 370 ntBASIC1.86□□□□□ -2.11
TTC28Q96AY4 AC103987.3-201ENST00000582071 292 ntBASIC1.86□□□□□ -2.11
TTC28Q96AY4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TTC28Q96AY4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TTC28Q96AY4 PNPT1P2-201ENST00000456768 2050 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TTC28Q96AY4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TTC28Q96AY4 RNU6-882P-201ENST00000391025 103 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.85□□□□□ -2.11
TTC28Q96AY4 CALM1P2-201ENST00000452941 448 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.85□□□□□ -2.11
TTC28Q96AY4 AC021146.5-201ENST00000503544 545 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 AF131216.2-201ENST00000512316 564 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 RNU2-58P-201ENST00000516403 183 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 AP003467.2-201ENST00000520175 319 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 AC002076.2-201ENST00000617362 122 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TTC28Q96AY4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
TTC28Q96AY4 MIR708-201ENST00000390708 88 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 RNU2-22P-201ENST00000411266 212 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 BNIP3P2-201ENST00000441221 577 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 RPL36AP33-201ENST00000450395 310 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.85□□□□□ -2.11
TTC28Q96AY4 MTCYBP17-201ENST00000503579 789 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
TTC28Q96AY4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.85□□□□□ -2.11
TTC28Q96AY4 AL645939.4-201ENST00000604495 135 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 AC008121.2-201ENST00000614647 523 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 AL157834.3-201ENST00000615543 103 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 HPVC1-201ENST00000629899 1198 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 MTCO1P22-201ENST00000604619 1360 ntBASIC1.85□□□□□ -2.11
TTC28Q96AY4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TTC28Q96AY4 SSXP1-201ENST00000453640 473 ntBASIC1.84□□□□□ -2.11
TTC28Q96AY4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.84□□□□□ -2.11
TTC28Q96AY4 AC109471.1-201ENST00000511631 612 ntBASIC1.84□□□□□ -2.11
TTC28Q96AY4 AC119751.1-201ENST00000513357 765 ntBASIC1.84□□□□□ -2.11
TTC28Q96AY4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.84□□□□□ -2.11
TTC28Q96AY4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.84□□□□□ -2.11
TTC28Q96AY4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.84□□□□□ -2.11
TTC28Q96AY4 AL158196.1-201ENST00000616786 434 ntBASIC1.84□□□□□ -2.11
TTC28Q96AY4 AL133412.1-201ENST00000380194 2992 ntBASIC1.84□□□□□ -2.12
TTC28Q96AY4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.84□□□□□ -2.12
TTC28Q96AY4 MTCYBP7-201ENST00000419540 1134 ntBASIC1.84□□□□□ -2.12
TTC28Q96AY4 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.84□□□□□ -2.12
TTC28Q96AY4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC1.84□□□□□ -2.12
TTC28Q96AY4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.84□□□□□ -2.12
TTC28Q96AY4 AC107393.1-201ENST00000512403 346 ntBASIC1.84□□□□□ -2.12
TTC28Q96AY4 AC019176.1-201ENST00000518519 225 ntBASIC1.84□□□□□ -2.12
TTC28Q96AY4 AC087854.1-201ENST00000519706 414 ntBASIC1.84□□□□□ -2.12
TTC28Q96AY4 AC007536.1-201ENST00000533382 349 ntBASIC1.84□□□□□ -2.12
TTC28Q96AY4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.84□□□□□ -2.12
TTC28Q96AY4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC1.84□□□□□ -2.12
TTC28Q96AY4 AC093775.1-201ENST00000624154 1868 ntBASIC1.84□□□□□ -2.12
TTC28Q96AY4 BX649567.1-201ENST00000642071 1134 ntBASIC1.84□□□□□ -2.12
TTC28Q96AY4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 SNORA79B-201ENST00000410557 148 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 POLHP1-201ENST00000411806 470 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 MTND1P18-201ENST00000448191 573 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.83□□□□□ -2.12
TTC28Q96AY4 FABP5P5-201ENST00000515537 406 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 AP001207.1-201ENST00000524051 481 ntBASIC1.83□□□□□ -2.12
TTC28Q96AY4 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms